Query= MSMg01no383_p07.b1 MSMg01no383_p07.b1 CHROMAT_FILE:
MSMg01no383_p07.b1 PHD_FILE: MSMg01no383_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:08 2005
(467 letters)
>mm_chr14_61674910_61675775
Length = 866
Score = 822 bits (425), Expect = 0.0
Identities = 452/465 (97%), Gaps = 10/465 (2%)
Strand = Plus / Plus
Query: 4 ggaattcagtcctttgccagagcaccaagggctagtctctccagctcctgttactcttat 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtcctttgcaagagcaccaagggctagtctctccagctcctgttactcttat 263
Query: 64 aaacattacttctgcactttcctctttttgtcctttaaaagcccctctactcatttgtta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 264 aaacattacttctgcactttcctctttttgtcctttaaaagcccctctactcacttgt-a 322
Query: 124 cg-gcttgcatagctgtttcactccatggattctgacgctgccctgtctccttcagactg 182
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 -gagcttgcatagctgtttcactccatggattctgacgctgccctgtctccttcagactg 381
Query: 183 tttctttcttgccttttagtgtgccttgtgattttaatccgtcaatcaatcaattgctga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttctttcttgccttttagtgtgccttgtgattttaatccgtcaatcaatcaattgctga 441
Query: 243 aagtcgatcacatgggtgaggtgccaggaaggggagcgattaggctttttaggcgtgttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aagtcgatcacatgggtgaggtgccaggaaggggagcgattaggctttttaggcgtgttt 501
Query: 303 cgtgtattctatggcagccgtgcatgcgactcggtttccttgcaccctgctttgtttttt 362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cgtgtgttctatggcagccgtgcatgcgactcggtttccttgcaccctgctttgtttttt 561
Query: 363 cttcctgctggaggtctggcaccccaggaactccttccgccgtcctgccgctttctcgtg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cttcctgctggaggtctggcaccccaggaactccttccgccgtcctgccgcttt------ 615
Query: 423 taattcaccgctactttcctagcgcctttgatgtggtgggaggct 467
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 -aattcaccgctactttcctagcgcctttgatgtggtgggaggct 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 866
Length adjustment: 10
Effective length of query: 457
Effective length of database: 856
Effective search space: 391192
Effective search space used: 391192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_p07.g1 MSMg01no383_p07.g1 CHROMAT_FILE:
MSMg01no383_p07.g1 PHD_FILE: MSMg01no383_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:08 2005
(516 letters)
>mm_chr14_61859685_61860601
Length = 917
Score = 878 bits (454), Expect = 0.0
Identities = 502/518 (96%), Gaps = 3/518 (0%)
Strand = Plus / Minus
Query: 1 ttgggtggaaggcatgacaggagggcaggggtgaggatgactctgggatgaccatcgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttgggtggaaggcatgacaggagggcaggggtgaggatgactctgggatgaccatcgccc 658
Query: 61 agctgtgcttcagaacatggaaatcacatataggctgctacatgggcctgtactatggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agctgtgcttcagaacatggaaatcacatataggctgctacatgggcctgtactatggtc 598
Query: 121 cctccagggctacccatactgaaggaagaagtggtccagtgtggccgagaatgcacaggg 180
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 597 cctccagggctacccacactgaaggaagaagtggtccagtgtggctgagaatgcacaggg 538
Query: 181 aatgaagctaagtaaccccagaaggttttac-gcacggtggtcgccatgatctcca-cgg 238
||||||| ||||||| |||||| |||||||| ||||||||||||||||||||| || |||
Sbjct: 537 aatgaagttaagtaatcccagatggttttacagcacggtggtcgccatgatct-cagcgg 479
Query: 239 cattgtctttgttttaccggcccttttgtgactgcagacttggggaacgcagcccctgga 298
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 478 cattgtctttggtttaccggcccttttgtgactgcagacttggggaacacagcccctgga 419
Query: 299 acacaaacttctctcttcctgaaagtgcttctcagttaaagttctccaataagtatttat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acacaaacttctctcttcctgaaagtgcttctcagttaaagttctccaataagtatttat 359
Query: 359 ttcatcaagaacacagtgaacaagcagccttaaaagggtgtttaggatgccttaagagat 418
|||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||
Sbjct: 358 ttcatcaagaacacagtgaacatgcagtcttaaaagggtgtttaggatgtcttaagagat 299
Query: 419 aatgaatcctaactgtgcttgtggttcgcgtacgtatatacatttgtgggctgaaacttc 478
|||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 298 aatgaatcctaactgtgcttgtggttcgtgtacgtacatgcatttgtgggctgaaacttc 239
Query: 479 aagaattgtatgccccagaagagtccattttactatat 516
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aagaattgtatgccccagaagagtccattttactatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 917
Length adjustment: 10
Effective length of query: 506
Effective length of database: 907
Effective search space: 458942
Effective search space used: 458942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
