Query= MSMg01no384_j21.b1 MSMg01no384_j21.b1 CHROMAT_FILE:
MSMg01no384_j21.b1 PHD_FILE: MSMg01no384_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:57 2005
(532 letters)
>mm_chr14_105061197_105062128
Length = 932
Score = 919 bits (475), Expect = 0.0
Identities = 502/511 (98%)
Strand = Plus / Minus
Query: 22 aacaggtcaatataataacaatcctctgaattaagaaggaccgaggaaggctgcaccatg 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aacaggtcaatataataacaatcctctgaattaagaaggaccgaggaaggctgcaccatg 673
Query: 82 gagaaaagtgtttggaagagaggcgaggaacagagaaggcacagacttctgcaaacacta 141
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gagaaaagcgtttggaagagaggcgaggaacagagaaggcacagacttctgcaaacacta 613
Query: 142 ccattacacaaggctttgaagcccagcttctcagttcagcactgtagacatctgctgcca 201
||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 612 ccactacacaaggctttgacgcccagcttctcagttcagcactgtagacgtctgctgcca 553
Query: 202 ggtgactctgctgggagcgtgttcagagaaatagaggtggtttcacagtatccctgcctt 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggtgactctgctgggagcgtgttcagagaaatagaggtggtttcacagtatccctgcctt 493
Query: 262 ctaccctcaccacatgcagtcacaacgctcaactgtaccaaccagaagcatatacatggt 321
|||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 492 ctaccctcaccacatgtagtcacaacgctcaactgtaccaatcagaagcacatacatgat 433
Query: 322 cctgggaagtgggggagtacagagaaagaggataaagaactgggaaaatcaactctctaa 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cctgggaagtgggggagtacagagaaagaggataaagaactgggaaaatcaactctctaa 373
Query: 382 gaattactggtctgaagtacagcatcagacactgacagccttatttcctaaatgggaaag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaattactggtctgaagtacagcatcagacactgacagccttatttcctaaatgggaaag 313
Query: 442 ttagagcacagtaagattaacaatagagtgtttgcaacaaaatatccgaggagaccaact 501
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 312 ttagagcacagtaagattaacaatagagtgtttgcaacaaaatatccaaggagaccaact 253
Query: 502 ttacacagagataaggtttatatggcttaat 532
|||||||||||||||||||||||||||||||
Sbjct: 252 ttacacagagataaggtttatatggcttaat 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_j21.g1 MSMg01no384_j21.g1 CHROMAT_FILE:
MSMg01no384_j21.g1 PHD_FILE: MSMg01no384_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:57 2005
(533 letters)
>mm_chr14_104873249_104874183
Length = 935
Score = 984 bits (509), Expect = 0.0
Identities = 528/535 (98%), Gaps = 2/535 (0%)
Strand = Plus / Plus
Query: 1 agtacctcttccaagaagcctgcttaaaaacaggttccttccagggcacccagacatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtacctcttccaagaagcctgcttaaaaacaggttccttccagggcacccagacatgca 260
Query: 61 gaagagaccaactcccttcaagactccaaggagaaaacacctctgcgaagcttccagact 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagagaccaactcctttcaagactccaaggagaaaacacctctgcgaagcttccagact 320
Query: 121 tccttactgttcacctgtgtagtaagaatcaaataggaccaaaatccatcctctctcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttactgttcacctgtgtagtaagaatcaaataggaccaaaatccatcctctctcctc 380
Query: 181 acactaagttctggtgaatgccccaggcaaatctttgccttttgaagattgagtctttgt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactaagttctggtgaatgcccgaggcaaatctttgccttttgaagattgagtctttgt 440
Query: 241 agcctaactaatacaaaaagccctcaggtttcatccaactgtgtttgggagggcctgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcctaactaatacaaaaagccctcaggtttcatccaactgtgtttgggagggcctgctg 500
Query: 301 cttgctctctaccacagcaccaaggaccttatctgaaaaagaggaactgcaactcaaggc 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttctctctaccacagcaccaaggaccttatctgaaaaagaggaactgcaactcaaggc 560
Query: 361 tttctagaccgcctctgtcacgtcaaactgagttcaccctagccgag--ctccagatgga 418
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 attctagatcgcctctgtcacgtcaaactgagttcaccctagccgagagctccagatgga 620
Query: 419 ttcttaaagctgcaccttaatagatgcttcctcgctgtgagtagagttccgagaattagg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttaaagctgcaccttaatagatgcttcctcgctgtgagtagagttccgagaattagg 680
Query: 479 caataaatgttcactctgcactctgagatcattgcttaaaaggttttctctctgc 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caataaatgttcactctgcactctgagatcattgcttaaaaggttttctctctgc 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 935
Length adjustment: 10
Effective length of query: 523
Effective length of database: 925
Effective search space: 483775
Effective search space used: 483775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
