Query= MSMg01no385_m03.b1 MSMg01no385_m03.b1 CHROMAT_FILE:
MSMg01no385_m03.b1 PHD_FILE: MSMg01no385_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:25 2005
(439 letters)
>mm_chr14_22718087_22718925
Length = 839
Score = 596 bits (308), Expect = e-174
Identities = 326/334 (97%), Gaps = 6/334 (1%)
Strand = Plus / Minus
Query: 5 gaattcacatggatagacccacagaagtatccaactcccaccccagacaagccaaggtcc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaattcacatggagagacccacagaagtatccaactcccaccccagacaagccaaggtcc 275
Query: 65 atatctgggacattagacaccaaaagtgaatagagactcggtcataacagcagcaagcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atatctgggacattagacaccaaaagtgaatagagactcggtcataacagcagcaagcat 215
Query: 125 aatgatgacagctggcaagatggctcagtgagtaaaggtgcttgcagccaagcctgagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatgatgacagctggcaagatggctcagtgagtaaaggtgcttgcagccaagcctgagcc 155
Query: 185 tcagttcaaaccctgagatccacatagtagatagaaggagaaaatagattctgtgactgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tcagttcaaaccctgagatccacatagtagatagaaggagaaaatagattctgtgactgt 95
Query: 245 cctatgactt-caaacacacacataccacagcacacatgct----catacagtaagtaaa 299
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 94 cctatgacttacaaacacacacataccacagcacacatgctcatacatacagtaagtaaa 35
Query: 300 tgttatcttaaaaaattttttt-aaatctactct 332
|||||||||||||| ||||||| |||||||||||
Sbjct: 34 tgttatcttaaaaattttttttaaaatctactct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_m03.g1 MSMg01no385_m03.g1 CHROMAT_FILE:
MSMg01no385_m03.g1 PHD_FILE: MSMg01no385_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:25 2005
(459 letters)
>mm_chr14_22558966_22559824
Length = 859
Score = 878 bits (454), Expect = 0.0
Identities = 457/458 (99%)
Strand = Plus / Plus
Query: 1 tctattccatggcctgaaagatgaaactgtatgtttccaaacaaacatgagaaaggcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctattccatggcctgaaagatgaaactgtatgtttccaaacaaacatgagaaaggcaaa 260
Query: 61 tgcaggcagcggtgagaagcactgtgggccatctggaggaggcttatcctggtactccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaggcagcggtgagaagcactgtgggccatctggaggaggcttatcctggtactccca 320
Query: 121 cccatcagccaccctaaacccctacatgggtcttacttacgcatctcccaagaaaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccatcagccaccctaaacccctacatgggtcttacttacgcatctcccaagaaaaggtt 380
Query: 181 gggccagacctcattgatgtgggtcagtgtggcagtccgacggacccacagcaatcgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggccagacctcattgatgtgggtcagtgtggcagtccgacggacccacagcaatcgctg 440
Query: 241 cagagaggccagtgtgggtggctggtagggggacacctggactgccccatgaatctttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagagaggccagtgtgggtggctggtagggggacacctggactgccccatgaatctttgg 500
Query: 301 cctccgaagttcctgcttctgtagcgagtccattctgggaacagagtaaacaggacagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctccgaagttcctgcttctgtagcgagtccattctgggaacagagtaaacaggacagta 560
Query: 361 gctggaacaggctccccaagcgtgggtccagtggacagggagacctgtgttgcagtacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctggaacaggctccccaagcgtgggtccagtggacagggagacctgtgttgcagtacca 620
Query: 421 ggagccagtggggtgctgtgggggccagcctcagctat 458
|||||||||||| |||||||||||||||||||||||||
Sbjct: 621 ggagccagtgggatgctgtgggggccagcctcagctat 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
