Query= MSMg01no388_b11.b1 MSMg01no388_b11.b1 CHROMAT_FILE:
MSMg01no388_b11.b1 PHD_FILE: MSMg01no388_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:20 2005
(645 letters)
>mm_chr14_11209732_11210777
Length = 1046
Score = 1172 bits (606), Expect = 0.0
Identities = 633/642 (98%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccatacaatgtaacaggttaagagactcattgacaaattcagacttgaaaact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccatacaatgtaacaggttaagagactcattgacaaattcagacttgaaaact 264
Query: 65 aaaccatatatatcctgactaagactagacagtaaagcagagtctgtttatattttaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaccatatatatcctgactaagactagacagtaaagcagagtctgtttatattttaaaa 324
Query: 125 aatggaagtagaaaccttttgtgttccagtcacactaccaccaaatcttcctccaatcca 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 aatggaagtagaaaccttttgtgttccagtcacactagcaccaaatcttcctccaatcca 384
Query: 185 gagctccacagaaagaagagctctaacggaaatgctgacacaaccagtcttatggcgctt 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 385 gagctccacagaaagaagagctctaacggaaatgctgacacaaccagtctcatggtgctt 444
Query: 245 catatgaaaagctgcaattctttttttt-ctttttaattgttcactagatgaaagaaaag 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 catatgaaaagctgcaattctttttttttctttttaattgttcactagatgaaagaaaag 504
Query: 304 cccaacagaacaaaaacataataactatctagaaacagtctctcagaattcttggattat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cccaacagaacaaaaacataataactatctagaaacagtctctcagaattcttggattat 564
Query: 364 agacaatgcacatgaaatgctattatcttcagccgtagccagaagatgtcagacaatcaa 423
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 565 agacaatgcacatgaaatgctattatcttcggccatagccagaagatgtcagacaatcaa 624
Query: 424 ttcatataacataccagcttaataaaatctgcatacaaaatttatgaatgcagtaatatt 483
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcatataacatgccagcttaataaaatctgcatacaaaatttatgaatgcagtaatatt 684
Query: 484 ctttttatcacaagttattaatggtcaatttaatgaacagctacagctggagtactttgg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 685 ctttttatcacaagttattaatggtcaatttaatgaacagctacagctggagtacgttgg 744
Query: 544 gtctgtatgatattttaatcatctttaggcatggatttaaacgtgttcattttataacca 603
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 745 gtctgtatgatattttaatcatctttaggcatggatttaaacatgttcattttataacca 804
Query: 604 tcagctatttgagataagaaagctttaacataagtgctgaaa 645
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcagctatttgagataagaaagctttaacataagtgctgaaa 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space: 657860
Effective search space used: 657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_b11.g1 MSMg01no388_b11.g1 CHROMAT_FILE:
MSMg01no388_b11.g1 PHD_FILE: MSMg01no388_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:20 2005
(312 letters)
>mm_chr14_11385892_11386603
Length = 712
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Minus
Query: 1 ctatacagtttctggagccagatggatatttatatacatcttttaaaaaattcaatgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctatacagtttctggagccagatggatatttatatacatcttttaaaaaattcaatgtag 453
Query: 61 tgatggaattcattttctaaaagcaagttcgctccaggtttttaaagcttgagatgacct 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 452 tgatggaattcattttctaaaagcaagatcgctccaggtttttaaagcttgagatgacct 393
Query: 121 cgtttcccccacttcactagaaacatttaaaggccaagggtaactcatagcaaatcccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cgtttcccccacttcactagaaacatttaaaggccaagggtaactcatagcaaatcccta 333
Query: 181 tgaaagttggctggtacacttgtcaaagccaccaaacaatttcagtctctcttaggcact 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 332 tgaaagttggctggtacacttgtcaaagccaccaaacaattttagtctctcttaggcact 273
Query: 241 ttctgcttgaccatttgactcccctttcataagccattttcctatacacaactccctcaa 300
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 272 ttcagcttgaccatttgactcccctttcataagccattttcctgtacacaactccctcaa 213
Query: 301 cctaacttccat 312
||||||||||||
Sbjct: 212 cctaacttccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
