Query= MSMg01no390_b15.b1 MSMg01no390_b15.b1 CHROMAT_FILE:
MSMg01no390_b15.b1 PHD_FILE: MSMg01no390_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:54 2005
(341 letters)
>mm_chr14_71231248_71231988
Length = 741
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Minus
Query: 1 atgcattacagttctggcatccctgcctagggaatggtgccacccacaattggctgagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atgcattacagttctggcatccctgcctagggaatggtgccacccacaattggctgagtc 668
Query: 61 aattaacagttaagacactctccccaaagactgcctataagctaaagtgatctagataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aattaacagttaagacactctccccaaagactgcctataagctaaagtgatctagataat 608
Query: 121 tcctcattcaggctgttatcccagaggattctatgttgttgtagcatattgacatttaaa 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 607 tcctcattcaggctgttatcccagaggattctatgttgttgtagcaggttgacatttaaa 548
Query: 181 agtagcagtaacaccatacaagttcatctcctcctcatataggcatctgttcagacatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agtagcagtaacaccatacaagttcatctcctcctcatataggcatctgttcagacatgc 488
Query: 241 ctatagcattctttgagaacatatatatcttttttaaccatgtaggatcattctgaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctatagcattctttgagaacatatatatcttttttaaccatgtaggatcattctgaatgt 428
Query: 301 attggatgttcataaatggtattatcatgtgactattattc 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 attggatgttcataaatggtattatcatgtgactattattc 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_b15.g1 MSMg01no390_b15.g1 CHROMAT_FILE:
MSMg01no390_b15.g1 PHD_FILE: MSMg01no390_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:54 2005
(247 letters)
>mm_chr14_71041919_71042561
Length = 643
Score = 458 bits (237), Expect = e-133
Identities = 243/247 (98%), Gaps = 4/247 (1%)
Strand = Plus / Plus
Query: 1 tggctcgggtgggaattcccagaagcagccttaaaaggaggagcctccctccagggagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggctcgggtgggaattcccagaagcagccttaaaaggaggagcctccctccagggagca 260
Query: 61 ggggtgggcttggcttgagcggctgctggctcagcttctctgctgtcaccccttgccact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggtgggcttggcttgagcggctgctggctcagcttctctgctgtcaccccttgccact 320
Query: 121 aggaaggaggggtaaggctgtgaacagtgggtgcaacaggttgaggccagagatggggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaggaggggtaaggctgtgaacagtgggtgcaacaggttgaggccagagatggggag 380
Query: 181 tcaggtgcaggcagctcttgaaagatctcaatgctcacaaaaactggtttgaaatggaga 240
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaggtgcag----ctcttgaaagatctcaatgctcacaaaaactggtttgaaatggaga 436
Query: 241 tccgaag 247
|||||||
Sbjct: 437 tccgaag 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 643
Length adjustment: 9
Effective length of query: 238
Effective length of database: 634
Effective search space: 150892
Effective search space used: 150892
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
