Query= MSMg01no390_d07.b1 MSMg01no390_d07.b1 CHROMAT_FILE:
MSMg01no390_d07.b1 PHD_FILE: MSMg01no390_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:03 2005
(519 letters)
>mm_chr14_60862961_60863878
Length = 918
Score = 949 bits (491), Expect = 0.0
Identities = 509/515 (98%), Gaps = 1/515 (0%)
Strand = Plus / Minus
Query: 5 attcagagattgtctgcctctgcctcctgagtattgtgatcaaaggtgtgaaccaccaca 64
|||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 781 attcagagattgcctggctctgcctcctgagtattgcgatcaaaggtgtgaaccaccaca 722
Query: 65 cccatcttttagttctttttcttaacccgaaggttttatattcaccataatttagtcctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cccatcttttagttctttttcttaacccgaaggttttatattcaccataatttagtcctg 662
Query: 125 acttgtgtatctctattctacttagggtagatagagaaaaggatcccagacataaaatac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acttgtgtatctctattctacttagggtagatagagaaaaggatcccagacataaaatac 602
Query: 185 taatgaagaccagcataatatctgtatgattaagataaaaatgagattttttttttaaac 244
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 601 tcatgaagaccagcataatatctgtatgattaagataaaaatgaga-tttttttttaaac 543
Query: 245 aggaacagcagcaacaacatctgcgtctacaacaggcttcagtttaggattcagtaaacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aggaacagcagcaacaacatctgcgtctacaacaggcttcagtttaggattcagtaaacc 483
Query: 305 tgcggcatctgccacaccatttgccctgcctgtcacttctacctcagctagtggtcttac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgcggcatctgccacaccatttgccctgcctgtcacttctacctcagctagtggtcttac 423
Query: 365 tctctcatctgctctgacatcaactccagcaggtgagacagaatgggaagaaagttgaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tctctcatctgctctgacatcaactccagcaggtgagacagaatgggaagaaagttgaat 363
Query: 425 ttgttggttatagtaaagttttttccagttagcgagtgaatacccagtaaccatttaaat 484
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 362 ttgttggttatagtaaagttttttccagttagcgagcgaatacccagtaaccatttaaat 303
Query: 485 taaacaactcaggggtggggagatggttcagtagg 519
|||||||||||||||||||||||||||||||||||
Sbjct: 302 taaacaactcaggggtggggagatggttcagtagg 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 918
Length adjustment: 10
Effective length of query: 509
Effective length of database: 908
Effective search space: 462172
Effective search space used: 462172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_d07.g1 MSMg01no390_d07.g1 CHROMAT_FILE:
MSMg01no390_d07.g1 PHD_FILE: MSMg01no390_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:03 2005
(466 letters)
>mm_chr14_60695742_60696606
Length = 865
Score = 801 bits (414), Expect = 0.0
Identities = 450/462 (97%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 1 aaacctagaagcatgtatgtctatccactcactcgaagcctcactctgtgcatcctcagg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aaacctagaagcatgtatgtctatccactcactcgaagcctcactctatgcatcctcagg 260
Query: 61 aagcccaggtaatcttggggaagacccctcaaaaaagctctgttggctaaggcagaccca 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcccagggaatcttggggaagacccctcaaaaaagctctgttggctaaggcagaccca 320
Query: 121 tatctggaaagatacacgttggctgttacactccagtgcccctcatatccctgtaccatc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 tatctggaaagatacacgttggctgttacactccactgcccctcatatccctgtaccatc 380
Query: 181 aggctcggggctgctgtggtctgaagcaaaatctccccccaggtcttctcatgggaaggg 240
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 381 aggctcggggctgctgtggtctgaagcaaaatct-cccccgggtcttctcatgggaaggg 439
Query: 241 gaacagccccctcttgaactacagcacaaggctctacagtaaggcttagaaggaacttag 300
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaacaacccccacttgaactacagcacaaggctctacagtaaggcttagaaggaacttag 499
Query: 301 cccaagagcttatacagattggtacctccccaaacaccccttggtaatagttgtgggttt 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 cccaagagcttatacagattggtacctccccaaacaccccttggtaacagttgtgggttt 559
Query: 361 cttaacactggagtctcttgctctccctgcttggtcctatatgacgtagctggaggtgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttaacactggagtctcttgctctccctgcttggtcctatatgacgtagctggaggtgag 619
Query: 421 gtgttatggaaagctttctgtgccccagtggagggtaggaga 462
|||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 620 gtgttacggaaatctttctgtgccccagtggagggtaggaga 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 865
Length adjustment: 10
Effective length of query: 456
Effective length of database: 855
Effective search space: 389880
Effective search space used: 389880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
