Query= MSMg01no390_d15.b1 MSMg01no390_d15.b1 CHROMAT_FILE:
MSMg01no390_d15.b1 PHD_FILE: MSMg01no390_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:04 2005
(511 letters)
>mm_chr14_103475050_103475960
Length = 911
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%)
Strand = Plus / Plus
Query: 1 gaaaatatttctttacagtggagagcctatttatctgggaaatgaaacatctatttttgg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 gaaaatatttctttacagtggagagcctatttacctgggaaatgaaacatctatttttgg 260
Query: 61 gcccaaaggaaacaagactcttgctttggccataaaaaaattttatggccccttcagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcccaaaggaaacaagactcttgctttggccataaaaaaattttatggccccttcagacc 320
Query: 121 gtatttgtcaaccaaagattttctgatgaatttcttgaaaatttttgatacagtgattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatttgtcaaccaaagattttctgatgaatttcttgaaaatttttgatacagtgattat 380
Query: 181 acacagagagttctacttgttttataactttgagtattggtttctaccaatgaaaccccc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacagacagttctacttgttttataactttgagtattggtttctaccaatgaaaccccc 440
Query: 241 ctttgtcaaaataacatacgaagaaaccccgttacctacccgacatacaacatttaccga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttgtcaaaataacatacgaagaaaccccgttacctacccgacatacaacatttaccga 500
Query: 301 cttgtgacaacttccactctgctgctctccagacagcagcatccatgttcttccagggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgtgacaacttccactctgctgctctccagacagcagcatccatgttcttccagggct 560
Query: 361 gtgtctacagtggtgtctttattcaccttccctccctggggctcactgttggaagtgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtctacagtggtgtctttattcaccttccctccctggggctcactgttggaagtgcag 620
Query: 421 tatctggacatttcaagactcttgcagagtagcagaaaccgtaattgtactggccaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatctggacatttcaagactcttgcagagtagcagaaaccgtaattgtactggccaaagt 680
Query: 481 gaatgggttgtaatcgttatttgagaattac 511
|||||||||||||||||||||||||||||||
Sbjct: 681 gaatgggttgtaatcgttatttgagaattac 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_d15.g1 MSMg01no390_d15.g1 CHROMAT_FILE:
MSMg01no390_d15.g1 PHD_FILE: MSMg01no390_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:04 2005
(486 letters)
>mm_chr14_103630760_103631645
Length = 886
Score = 555 bits (287), Expect = e-162
Identities = 352/401 (87%), Gaps = 44/401 (10%)
Strand = Plus / Minus
Query: 1 taagaattgtgtcaccaatacactatgataaattagtgttttgatccctgtactgttgtg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 taagaattgtgtcgccaatacactatgataaattagtgttttgatccctgtactgttgtg 342
Query: 61 atggaaaaaagacataaactgagctttataataacaatagttcactatacttccccaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 341 atggaaaaaagacataaactgagctttataataacaatagttcactatacttcccaaaaa 282
Query: 121 tagctatgtttaacaaatgctatttggtggccaggggaaatggctcagttgtcacagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tagctatgtttaacaaatgctatttggtggccaggggaaatggctcagttgtcacagtat 222
Query: 181 agctcttctctctgtctccgttctgtctgtctgtctgtctgtctgtctgtctctctctct 240
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 221 agctcttctctctgtctccgttctgtctgtctgtctgcctgtctgtctctctctctctct 162
Query: 241 ctctctct----------tactcacacacacacaca--------cagacacacacacaca 282
|||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 161 ctctctctctctctctcttacacacacacacacacagacacacacagacacacacacaca 102
Query: 283 cacacac--------------------------cacccttacttcagattgccagccttc 316
||||||| |||||||||||||||||||||||||||
Sbjct: 101 cacacacacacacacacacacacacacacacaacacccttacttcagattgccagccttc 42
Query: 317 acatgaaagccaaggtgatcatttccctagctgggatgcct 357
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 acatgaaagccaaggtgatcatttccctagctgggatgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
