Query= MSMg01no390_o20.b1 MSMg01no390_o20.b1 CHROMAT_FILE:
MSMg01no390_o20.b1 PHD_FILE: MSMg01no390_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:59 2005
(445 letters)
>mm_chr14_108060428_108061272
Length = 845
Score = 832 bits (430), Expect = 0.0
Identities = 438/441 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtttagctatgtattctatttttttaattggagtatttggactattggtttct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttagctatgtattctatttttttaattggagtatttggactattggtttct 264
Query: 65 agaccccttattgaattctttatatattttgaatattagctctctgtcatatgtaagatg 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaccccttattgaattctttaaatattttgaatattagctctctgtcatatgtaagatg 324
Query: 125 gtgaagatcttttcctaatctgttacctgtcattttgtcttcttgcagtgtgatgggtga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgaagatcttttcctaatctgttacctgtcattttgtcttcttgcagtgtgatgggtga 384
Query: 185 ttttcaaagaacaagcatgggcatatattataatgtcatatcacaccacttgttggctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttcaaagaacaagcatgggcatatattataatgtcatatcacaccacttgttggctct 444
Query: 245 tcaaaaagcagtgggggttaagaataatggaggttttcaactcaagataaatgtgcataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcaaaaagcagtgggggttaagaataatggaggttttcaactcaagataaatgtgcataa 504
Query: 305 ccagaaataggaatagaatataatgccacgggttaatttttggtattaacaatgatgaga 364
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 ccagaaataggaatagaatataatgccacaggttaatttttggtattaacaatgatgaga 564
Query: 365 tactgagaagtttcagaanataccttttagcctgaagcactcctaaatgttaggtagaaa 424
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tactgagaagtttcagaaaataccttttagcctgaagcactcctaaatgttaggtagaaa 624
Query: 425 gtcatgttttaaatttacaca 445
|||||||||||||||||||||
Sbjct: 625 gtcatgttttaaatttacaca 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_o20.g1 MSMg01no390_o20.g1 CHROMAT_FILE:
MSMg01no390_o20.g1 PHD_FILE: MSMg01no390_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:59 2005
(482 letters)
>mm_chr14_108211716_108212598
Length = 883
Score = 857 bits (443), Expect = 0.0
Identities = 478/501 (95%), Gaps = 19/501 (3%)
Strand = Plus / Minus
Query: 1 tggctaacacaaatagactattatcaatgtatgttttctaaagtctgcagtgaatactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggctaacacaaatagactattatcaatgtatgttttctaaagtctgcagtgaatactgg 566
Query: 61 agatctgaacaaaatgtctcaggttagacttgtgagagtcttgaatatctgccattcaca 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agatctgaacgaaatgtctcaggttagacttgtgagagtcttgaatatctgccattcaca 506
Query: 121 gtgagttctagatcattttcccttcaaacctcacacgatgattttccaactcatccttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgagttctagatcattttcccttcaaacctcacacgatgattttccaactcatccttga 446
Query: 181 tgattttactccctagtgcatcctaactcagtgagtctcaagatatgttcacacaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgattttactccctagtgcatcctaactcagtgagtctcaagatatgttcacacaaattt 386
Query: 241 cagaagctcttataaacctattgcccactccttgttctagttatttgcatcaaaatttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagaagctcttataaacctattgcccactccttgttctagttatttgcatcaaaatttca 326
Query: 301 aattttcaaataccaatcatgttctttcacttattttttcatgttaattt-atttttttt 359
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 325 aattttcaaataccaatcatgttctttcatttattttttcatgttaattttatttttttt 266
Query: 360 ctccctcagaggagtattttactatctatgaatgacaagtaagtaaaaacagttatggaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctccctcagaggagtattttactatctatgaatgacaagtaagtaaaaacagttatggaa 206
Query: 420 aaatttatatatatatatatatatatatacacatatata------------------ata 461
||||||||||||||||||||||||||||| | ||||||| |||
Sbjct: 205 aaatttatatatatatatatatatatatatatatatatatatatatatatatatattata 146
Query: 462 ctgtcagaaatatgcttcaac 482
|||||||||||||||||||||
Sbjct: 145 ctgtcagaaatatgcttcaac 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
