Query= MSMg01no391_a15.b1 MSMg01no391_a15.b1 CHROMAT_FILE:
MSMg01no391_a15.b1 PHD_FILE: MSMg01no391_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:07 2005
(446 letters)
>mm_chr14_104462284_104463123
Length = 840
Score = 797 bits (412), Expect = 0.0
Identities = 432/442 (97%), Gaps = 6/442 (1%)
Strand = Plus / Plus
Query: 5 gaattctctcctcttttatttatgtggctacagaaataattgttaattgaaatattaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcctcttttatttatgtggctacagaaataattgttaattgaaatattaaat 264
Query: 65 attttttatttgagaaattaaataaaagagtgaggagaatttttaaatagaagagattat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attttttatttgagaaattaaataaaagagtgaggagaatttttaaatagaagagattat 324
Query: 125 ttccctactcctactccagaaaattattgtcaccctttccataattttctttagcataat 184
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccctactcc------agaaaattattgtcaccctttccataattttctttagcataat 378
Query: 185 atcctctaaacagtgttctacaattagaacgactacataatttactgtgcactataatgt 244
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 accctctaaacagtgttctacaattagaacgactacataatttactgtgcgctataatgt 438
Query: 245 tttcagtattcaatgaagaatattttcacgagaatacagttattataaaatcatgtggta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttcagtattcaatgaagaatattttcacgagaatacagttattataaaatcatgtggta 498
Query: 305 tgaaacagaatctcctcatgcttaaattgtattaataattaattgtgagaaaagtatttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgaaacagaatctcctcatgcttaaattgtattaataattaattgtgagaaaagtatttc 558
Query: 365 atcatgataaatgaaaggctgtgtggaaggattgctgccattttgtggctgacataatat 424
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 559 atcatgataaatgaaaggctgtgtggaaggaatgctgccattttgtggctgaaataatat 618
Query: 425 agtaacaggctgttgaatacag 446
||||||||||||||||||||||
Sbjct: 619 agtaacaggctgttgaatacag 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 840
Length adjustment: 10
Effective length of query: 436
Effective length of database: 830
Effective search space: 361880
Effective search space used: 361880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_a15.g1 MSMg01no391_a15.g1 CHROMAT_FILE:
MSMg01no391_a15.g1 PHD_FILE: MSMg01no391_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:08 2005
(497 letters)
>mm_chr14_104632444_104633339
Length = 896
Score = 899 bits (465), Expect = 0.0
Identities = 489/497 (98%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 1 caaacccactatgaacattctacgctacacactgtggagtgtgtttggtatcatagatac 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 caaacccactatgaacgttctacgctacacactgtggagtgtgtttggtatcatagatac 637
Query: 61 gactgccttttctgtatgaaacctacagaacggaatgaaatcttcaggtttgggtgtttt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gattgccttttctgtatgaaacctacagaacggaatgaaatcttcaggtttgggtgtttt 577
Query: 121 cagaggtcagcagagggctatggatcctgaatcctttgaatccagtggagagctttatcg 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 576 cagaggtcagcagagggctatggatcctgagtcctttgaatccagtggagagctttatct 517
Query: 181 ggaattccgttttaccttcatagacagcagactcccttcttatcagtgtgttttcttcct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaattccgttttacctacatagacagcagactcccttcttatcagtgtgttttcttcct 457
Query: 241 ttattgagagtggtcctgactcttggtgtgacagtaaactgctccttgttcttctcagct 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttagtgagagtggtcctgactcttggtgtgacagtaaactgctccttgttcttctcagct 397
Query: 301 acatttttttctatcacaatgagtccattctgcatggttgatagaggttctcagtggtca 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aca-ttttttctatcacaatgagtccattctgcatggttgatagaggttctcagtggtca 338
Query: 361 atttatgcagtgagtaacatgtccaacccgagagaaggaagtaagactctggttctggcc 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atttatgcagtgagtcacatgtccaacccgagagaaggaagtaagactctggttctggcc 278
Query: 421 ctaggttagcactcatactgaagtagtctactgaatcagaactgttctagaatggacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctaggttagcactcatactgaagtagtctactgaatcagaactgttctagaatggacagc 218
Query: 481 tcagtgtgtctgataca 497
|||||||||||||||||
Sbjct: 217 tcagtgtgtctgataca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 896
Length adjustment: 10
Effective length of query: 487
Effective length of database: 886
Effective search space: 431482
Effective search space used: 431482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
