Query= MSMg01no391_f07.b1 MSMg01no391_f07.b1 CHROMAT_FILE:
MSMg01no391_f07.b1 PHD_FILE: MSMg01no391_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:30 2005
(144 letters)
>mm_chr14_21964845_21965388
Length = 544
Score = 248 bits (128), Expect = 1e-70
Identities = 137/140 (97%)
Strand = Plus / Minus
Query: 5 catgagaatcaagaatcctgagctctaagtctgactagagaagcccagaagaaatccaga 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 catgagaatcaagaatcctgagctctaagtctgacgagagaagcccagaagaaatccaga 285
Query: 65 atgcaaacaaacttattttgttatcccacccaaaggaggcacataggtgggtggcactgg 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atgcaaacaaacttacattgttatcccacccaaaggaggcacataggtgggtggcactgg 225
Query: 125 gatctttaacaacagagtgg 144
||||||||||||||||||||
Sbjct: 224 gatctttaacaacagagtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no391_f07.g1 MSMg01no391_f07.g1 CHROMAT_FILE:
MSMg01no391_f07.g1 PHD_FILE: MSMg01no391_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:30 2005
(396 letters)
>mm_chr14_21777536_21778331
Length = 796
Score = 727 bits (376), Expect = 0.0
Identities = 392/398 (98%), Gaps = 2/398 (0%)
Strand = Plus / Plus
Query: 1 acctagtaggtacatgtgtttgtagtatttggtgggcctttaagtttcttaagagaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acctagtaggtacatgtgtttgtagtatttggtgggcctttaagtttcttaagagaaata 258
Query: 61 acttttgcaaatctcattgttctcctccacttccctccctttctctctctctctctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acttttgcaaatctcattgttctcctccacttccctccctttctctctctctctctctct 318
Query: 121 ctctctc--cctctctctctcttcctcttctcctttcccctctttttctttctcctggga 178
||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctctctctccctctctctctctccctcttctcctttcccctctttttctttctcctggga 378
Query: 179 attgaatgcatggcctggcacgtgctaggcaggtactccaccaccaagctacatctccag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attgaatgcatggcctggcacgtgctaggcaggtactccaccaccaagctacatctccag 438
Query: 239 acctagagcttcattcctgaaatgagatatctggaataaaactgctatattctttctcac 298
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acctagagcttcattcttgaaatgagatatctggaataaaactgctatattctttctcac 498
Query: 299 cccacaatacccaattcatgaaatggaagaggcctagtttgagtttctttgagggaactg 358
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 499 cccacaatacccaattcatgaagtggaagaggcctagtttgagtttctttgagggaattg 558
Query: 359 gtaggaaagtgggtggtgaggaatatctaagcatgtat 396
||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtaggaaagtgggtggtgaggaatatctaagcatgtat 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
