Query= MSMg01no391_o19.b1 MSMg01no391_o19.b1 CHROMAT_FILE:
MSMg01no391_o19.b1 PHD_FILE: MSMg01no391_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:17 2005
(409 letters)
>mm_chr14_116545180_116545991
Length = 812
Score = 574 bits (297), Expect = e-168
Identities = 320/329 (97%), Gaps = 3/329 (0%)
Strand = Plus / Minus
Query: 84 cctaatgcaacaaccccttaatacagttcctcacgttgtagtgatatccaataataaaat 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 cctaatgcaacaaccccttaatacagttcctcacgttgtagtgatatccaataataaaat 753
Query: 144 tattttcattactacataataactgaaattttgctactgtaatgaattataaaatctctg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tattttcattactacataataactgaaattttgctactgtaatgaattataaaatctctg 693
Query: 204 ttttctggtgatcttagatggccctcaagaaacactccttggacccctgatttattagtg 263
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 692 ttttctggtgatcttagatggccctcatgaaacactccttggacccctgacggattagtg 633
Query: 264 atcgcaggttgagaaacacggatttaggataatgatttcaagagattaactcttcaagtc 323
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 632 atcgcaggttgagaaacactgatttaggataatgatttcaagagattaactcttctagtc 573
Query: 324 tgcattgctatagtcagaattaagacttgtctgaaaataaaatattctgagaatacatag 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgcattgctatagtcagaattaagacttgtctgaaaataaaatattctgagaatacatag 513
Query: 384 attgatttttttttt---actatattagc 409
||||||||||||||| |||||||||||
Sbjct: 512 attgatttttttttttttactatattagc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 812
Length adjustment: 9
Effective length of query: 400
Effective length of database: 803
Effective search space: 321200
Effective search space used: 321200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_o19.g1 MSMg01no391_o19.g1 CHROMAT_FILE:
MSMg01no391_o19.g1 PHD_FILE: MSMg01no391_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:17 2005
(247 letters)
>mm_chr14_116379337_116379983
Length = 647
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%)
Strand = Plus / Plus
Query: 3 gactgactctggggaaattctcacagatctacaactgaaggtttgcttcagtaaagtcta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gactgactctggggaaattctcacagatctacaactgaaggtttgcttcagtaaagtcta 262
Query: 63 cctgcttctttatctagtcaagctgcagagatcaaccaccacgataaactgcttagttgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctgcttctttatctagtcaagctgcagagatcaaccaccacgataaactgcttagttgt 322
Query: 123 tgtgatagaaggagaaagtaaaagaaaaacagacagtaaacgcttagacagaaaatcttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtgatagaaggagaaagtaaaagaaaaacagacagtaaacgcttagacagaaaatctaa 382
Query: 183 tatacctatatctaaacaacatgtggcccaattaagatgtgagattccaggaagtaggga 242
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 383 catacctatatctaaacaacatgtggcccaattaagatgtgagatgccaggaagtaggga 442
Query: 243 ggtat 247
|||||
Sbjct: 443 ggtat 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
