Query= MSMg01no392_f18.b1 MSMg01no392_f18.b1 CHROMAT_FILE:
MSMg01no392_f18.b1 PHD_FILE: MSMg01no392_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:51 2005
(473 letters)
>mm_chr14_73799370_73800245
Length = 876
Score = 870 bits (450), Expect = 0.0
Identities = 466/472 (98%), Gaps = 3/472 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaccac-tatgtaatgtttagtttttaaaatagcagctg--aaaaaaaaaaaag 61
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 676 gaattcaaccacaaatgtaatgtttagtttttaaaatagcagctgaaaaaaaaaaaaaag 617
Query: 62 gcacaggatgcgtgagactaaaacctccgtttaggttctctctgtgtctgttaggtttcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gcacaggatgcgtgagactaaaacctccgtttaggttctctctgtgtctgttaggtttcc 557
Query: 122 gcagctccctcctgccctggccctgctggctgagaaaagttccctcagaggagcagccgc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcagctccctcctgccctggccctgctggctgagaaaagttccctcagaggagcagccgc 497
Query: 182 acagaggaacattctgcttcaactgtgttggcacagggttaaatgcaggctggctgtggt 241
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 acggaggaacattctgcttcaactgtgttggcacagggttaaatgcaggctggctgtggt 437
Query: 242 tcgtcagtgacttgctttactccttatttagcgactttgagtgtgtttgtcttggcctct 301
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcgtcagtggcttgctttactccttatttagcgactttgagtgtgtttgtcttggcctct 377
Query: 302 ctccttggatgtttgaagatatcattagatcaagatagtggcgcttctaaaatattgaac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctccttggatgtttgaagatatcattagatcaagatagtggcgcttctaaaatattgaac 317
Query: 362 tccgtaaaaatattttctggatattttatcttcagccagctgggtacctcatttttgttt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tccgtaaaaatattttctggatattttatcttcagccagctgggtacctcatttttgttt 257
Query: 422 tgggatgtgttctaccacacaactggagtctattaatgtaactccttgcctg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgggatgtgttctaccacacaactggagtctattaatgtaactccttgcctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 876
Length adjustment: 10
Effective length of query: 463
Effective length of database: 866
Effective search space: 400958
Effective search space used: 400958
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_f18.g1 MSMg01no392_f18.g1 CHROMAT_FILE:
MSMg01no392_f18.g1 PHD_FILE: MSMg01no392_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:51 2005
(426 letters)
>mm_chr14_73627988_73628813
Length = 826
Score = 808 bits (418), Expect = 0.0
Identities = 425/428 (99%), Gaps = 2/428 (0%)
Strand = Plus / Plus
Query: 1 aaaggtagagcatatgtttggtgtcaacatgctctacacacacatacacacacacactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggtagagcatatgtttggtgtcaacatgctctacacacacatacacacacacactta 260
Query: 61 cttttaaaattttttaaattacatcatcaccagattccatgttactcactagtaattgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttaaaattttttaaattacatcatcaccagattccatgttactcactagtaattgtt 320
Query: 121 aattgttttatttaagtccactcaatttttttatgacactcttaaatttaaggctcatct 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattgttttatttaaggccactcaatttttttatgacactcttaaatttaaggctcatct 380
Query: 181 agtggcaaaacttcttgtcagattcatctccagtgataccatgaagtgctccctgaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggcaaaacttcttgtcagattcatctccagtgataccatgaagtgctccctgaaaag 440
Query: 241 cccttccttttttctcttcttttcttttcttcttttcttttttttaaaaaaaa--tacta 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 cccttccttttttctcttcttttcttttcttcttttcttttttttaaaaaaaaaatacta 500
Query: 299 ttatttacttatgtgcatatatgcatgtatctgggcctgaggtcagaggcatcctctgga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatttacttatgtgcatatatgcatgtatctgggcctgaggtcagaggcatcctctgga 560
Query: 359 ggcagagttataagcagtttgagctgtctgatatgaattctgggaattgaacttgggtct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcagagttataagcagtttgagctgtctgatatgaattctgggaattgaacttgggtct 620
Query: 419 tctataag 426
||||||||
Sbjct: 621 tctataag 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
