Query= MSMg01no392_n01.b1 MSMg01no392_n01.b1 CHROMAT_FILE:
MSMg01no392_n01.b1 PHD_FILE: MSMg01no392_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:28 2005
(496 letters)
>mm_chr14_49431934_49432833
Length = 900
Score = 911 bits (471), Expect = 0.0
Identities = 489/497 (98%), Gaps = 4/497 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccaatgtccactagtgtcacctacattagttcttgccccttcatttccatatc 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccaatgacaactagtgtcacctacattagttcttgccccttcatttccatatc 263
Query: 64 atttggtaattagaatctgaagtcaggagacaagagataagttatcactttcctttatat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atttggtaattagaatctgaagtcaggagacaagagataagttatcactttcctttatat 323
Query: 124 tttttctcttccagcaactttacaaccttttgaatgtaatcgatttctgtcacatgctat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttttctcttccagcaactttacaaccttttgaatgtaatcgatttctgtcacatgctat 383
Query: 184 tcttcatctctatttgaaaaaaaaaaa----gggtctcccatgatcatttgaagaacaaa 239
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 tcttcatctctatttgaaaaaaaaaaaaaaagggtctcccatgatcatttgaagaacaaa 443
Query: 240 acctaaaatagtctacattctaagaataaaaacaacaccttctctggctttagacagtct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acctaaaatagtctacattctaagaataaaaacaacaccttctctggctttagacagtct 503
Query: 300 ttgccttccccccagcccccagggggcatgcgcagggaattatccactgaagaaagaaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgccttccccccagcccccagggggcatgcgcagggaattatccactgaagaaagaaag 563
Query: 360 aaacaaaacacacactcctattcctcgtttgtgttggatcaatcgtgagacaaacaacag 419
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 aaacaaaacaaacactcctattcctcatttgtgttggatcaatcgtgagacaaacaacag 623
Query: 420 tcttcagtggtggctggccatgagtctggcagtttgaaataccttagtcaggaggagtac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcttcagtggtggctggccatgagtctggcagtttgaaataccttagtcaggaggagtac 683
Query: 480 cccaaactgaaccgaac 496
|||||||||||||||||
Sbjct: 684 cccaaactgaaccgaac 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 900
Length adjustment: 10
Effective length of query: 486
Effective length of database: 890
Effective search space: 432540
Effective search space used: 432540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_n01.g1 MSMg01no392_n01.g1 CHROMAT_FILE:
MSMg01no392_n01.g1 PHD_FILE: MSMg01no392_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:29 2005
(250 letters)
>mm_chr14_49653795_49654444
Length = 650
Score = 484 bits (250), Expect = e-141
Identities = 250/250 (100%)
Strand = Plus / Minus
Query: 1 tgtagtctcagttccttcactgagttactctgagttactgactaagacttccgtcatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtagtctcagttccttcactgagttactctgagttactgactaagacttccgtcatttg 391
Query: 61 tgtgaaactgtgaagaaagaggggctactttacactttcagcagccctgggttgagctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtgaaactgtgaagaaagaggggctactttacactttcagcagccctgggttgagctgt 331
Query: 121 tttgttttttgtttttgtcatttatacataaaactattaaattatgttttaaagtctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tttgttttttgtttttgtcatttatacataaaactattaaattatgttttaaagtctcag 271
Query: 181 ataatttgcttataagaagaaaagagtttgctgtaaagttggtaacatttagttgtccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ataatttgcttataagaagaaaagagtttgctgtaaagttggtaacatttagttgtccag 211
Query: 241 attgtctccc 250
||||||||||
Sbjct: 210 attgtctccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
