Query= MSMg01no393_d21.b1 MSMg01no393_d21.b1 CHROMAT_FILE:
MSMg01no393_d21.b1 PHD_FILE: MSMg01no393_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:06 2005
(498 letters)
>mm_chr14_83546495_83547392
Length = 898
Score = 932 bits (482), Expect = 0.0
Identities = 491/494 (99%)
Strand = Plus / Plus
Query: 5 gaattctttaacttttgtgtggaatatttttcctatatcacattttattaacatgccact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaacttttgtgtggaatatttttcctatatcacattttattaacatgccact 264
Query: 65 atggtaactcaagttactaaaaactatacttgatagagatttatggaagaaagaaatggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggtaactcaagttactaaaaactatacttgatagagatttatggaagaaagaaatggt 324
Query: 125 cataccagagatttaaaaatcttaaaatgtcagctccaatgaactaaagtaaatctcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cataccagagatttaaaaatcttaaaatgtcagctccaatgaactaaagtaaatctcagg 384
Query: 185 ctcctaagctcaaaattatcatacccctcttttggaagttcccacaagaaaaccaagtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcctaagctcaaaattatcatacccctcttttggaagttcccacaagaaaaccaagtta 444
Query: 245 cacaaccttaatctatattcagaagatgtagcttagcaaacaggttccttgtttgtagtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacaaccttaatctatattcagaagatgtagcttagcaaacaggttccttgtttgtagtt 504
Query: 305 tcattcattgtgagcatctatagaccatattgagttgattttgtggaccatgttctctgt 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcattcattgtgagcatctatagaccatattgagttgattttgtggaccatgttctctgc 564
Query: 365 atgtgctttacctctctggattccaatctcataaactggaaacaacctaggtgaccctca 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtgctttacctctctggattccaatctcataaactggaaacaacctaggtgaccctca 624
Query: 425 agcaaaaaatggataaaggaaatatggtacatatacacaatggcgtattactcaggtgtt 484
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcaaagaatggataaaggaaatatggtacatatacacaatggcgtattactcaggtgtt 684
Query: 485 taaataaatgagat 498
||||||||||||||
Sbjct: 685 taaataaatgagat 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_d21.g1 MSMg01no393_d21.g1 CHROMAT_FILE:
MSMg01no393_d21.g1 PHD_FILE: MSMg01no393_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:06 2005
(442 letters)
>mm_chr14_83729329_83730170
Length = 842
Score = 634 bits (328), Expect = 0.0
Identities = 343/348 (98%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 95 agctaaaagaatttcattcattctactttaagatttattttatgtatgagtcgtctatct 154
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 842 agctaaaagaatttcattcattctactttaagatttattttatgtatgagtagtctatct 783
Query: 155 gcatgtacacctacatgccagaagagagcattacatcacactatagatggttgtgagcca 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gcatgtacacctacatgccagaagagagcattacatcacactatagatggttgtgagcca 723
Query: 215 ccatgtggttgctggggattaaactcaggacctctggaaaaaaaaaagtgttctcaactg 274
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 722 ccatgtggttgctggggattaaactcaggacctctgg-aaaaaaaaagtgttctcaactg 664
Query: 275 gtgagccatctctccagcccctcactccactttagaaatcagtatatgatcatgtatggt 334
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 663 gtgagccatctctccagcccctcactccactttagaaatcagtttatgatcaagtatggt 604
Query: 335 ccatcctcagctgtcaaatcctaggatagttacaatgaagacaccatacttgactatata 394
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 603 ccatcctcagctgtcaaatcctaggatagttacaatgaagacaccatgcttgactatata 544
Query: 395 ttgtttcatcatattcatttttaataacttacattacaaattctctaa 442
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttgtttcatcatattcatttttaataacttacattacaaattctctaa 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
