Query= MSMg01no396_p22.b1 MSMg01no396_p22.b1 CHROMAT_FILE:
MSMg01no396_p22.b1 PHD_FILE: MSMg01no396_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:16 2005
(465 letters)
>mm_chr14_105663965_105664827
Length = 863
Score = 723 bits (374), Expect = 0.0
Identities = 387/392 (98%), Gaps = 2/392 (0%)
Strand = Plus / Minus
Query: 6 aattcatcacagtatacaaaaaacttaaagaccgaaatggtccaaactttaaagatcaaa 65
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aattcatcacagtagaaaaaaaacttaaagaccgaaatggtccaaactttaaagatcaaa 331
Query: 66 aatttattgatgagggaagtttaaaaaaaaaaaaaaaactagacaactatttcaggagga 125
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 330 aatttattgatgagggaagtt--aaaaaaaaaaaaaaactagacaactatttcagaagga 273
Query: 126 aaaaaaagtctagatgtggtggtttcttgtgtaactatacccatgttactgcccagtgat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaaaaagtctagatgtggtggtttcttgtgtaactatacccatgttactgcccagtgat 213
Query: 186 tcttaccaaatgaggtgcatgcccacaagcagactgatacaagaatattcataagcttca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tcttaccaaatgaggtgcatgcccacaagcagactgatacaagaatattcataagcttca 153
Query: 246 tttataatacccaaaagctaaaacataccaactgtccaccaacaaagcaatggataagaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tttataatacccaaaagctaaaacataccaactgtccaccaacaaagcaatggataagaa 93
Query: 306 atggatattcacacaatttgtcatcaggtaaaattatacaattgcaaagagatgatacac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atggatattcacacaatttgtcatcaggtaaaattatacaattgcaaagagatgatacac 33
Query: 366 tgacatttatagcaacctgggtttatctcaaa 397
||||||||||||||||||||||||||||||||
Sbjct: 32 tgacatttatagcaacctgggtttatctcaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 863
Length adjustment: 10
Effective length of query: 455
Effective length of database: 853
Effective search space: 388115
Effective search space used: 388115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_p22.g1 MSMg01no396_p22.g1 CHROMAT_FILE:
MSMg01no396_p22.g1 PHD_FILE: MSMg01no396_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:16 2005
(454 letters)
>mm_chr14_105506030_105506883
Length = 854
Score = 878 bits (454), Expect = 0.0
Identities = 454/454 (100%)
Strand = Plus / Plus
Query: 1 ccccatgccaacaacgcattcatgaaatgggataatcatgggcacaggtgctaaccactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccatgccaacaacgcattcatgaaatgggataatcatgggcacaggtgctaaccactg 260
Query: 61 gaacaacccagtcttcagacaagaaaagactcctttggtgttttcagattcaataacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacaacccagtcttcagacaagaaaagactcctttggtgttttcagattcaataacagt 320
Query: 121 tcatagaaactgagttaaaataaatgacttattaaaggaaatcttgtgccagacagtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatagaaactgagttaaaataaatgacttattaaaggaaatcttgtgccagacagtatg 380
Query: 181 ttctgaagtatcatcacactcaaagcaggttttggattctgagaatcaaaagaaagcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgaagtatcatcacactcaaagcaggttttggattctgagaatcaaaagaaagcata 440
Query: 241 gaggaggatgctctgctgacgcttccctgtgtctcaccaacatccactaagtgctggaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggaggatgctctgctgacgcttccctgtgtctcaccaacatccactaagtgctggaat 500
Query: 301 caaatctgggggcaggacgacaaatacacaggaatggaaaactagtacaatgagtacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaatctgggggcaggacgacaaatacacaggaatggaaaactagtacaatgagtacaat 560
Query: 361 gtaataactcttttctttataactcagcaaatattctgtaaatacctgtacgaaatactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaataactcttttctttataactcagcaaatattctgtaaatacctgtacgaaatactc 620
Query: 421 tgccttcagttgagggaaggacagatgagagttt 454
||||||||||||||||||||||||||||||||||
Sbjct: 621 tgccttcagttgagggaaggacagatgagagttt 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
