Query= MSMg01no400_h23.b1 MSMg01no400_h23.b1 CHROMAT_FILE:
MSMg01no400_h23.b1 PHD_FILE: MSMg01no400_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:50 2005
(412 letters)
>mm_chr14_117652060_117652871
Length = 812
Score = 652 bits (337), Expect = 0.0
Identities = 391/409 (95%), Gaps = 4/409 (0%)
Strand = Plus / Plus
Query: 5 gaattccaggttctgtgcgtagaagagagtgggaaagaaccaagaccatgagctctaagc 64
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggctctgtgagtagaagagagtgggaaagaaccaagaccatgagctctaagc 264
Query: 65 agcccagttggaataaccattagagaaaagtttattaccaacttctcaggtctaacatcc 124
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 265 agcccagttggaataaccattagagaaaagtttattaccaactgctcaggtctaacatac 324
Query: 125 cccga-attttttggagacagactctcacagcaaacttcctgttcctctggctccaaaaa 183
||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 ccc-acattttttggagacagactctcacagcaaacttgctgttcctctggctccaaaaa 383
Query: 184 ttttctaactaccactcccacaacggctgacccctgagccttaagtatatgtattgtgtt 243
|||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 384 ttttct-actaccactcccaccacggctgacccctgagccttaagggtatgtattgtgtt 442
Query: 244 ctagaggtccagttagagttggccgctctgcacctctatctcgttttcttggatgtttgc 303
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 443 ctagaggtccagttagagttggccgctctgcacttctatctcgttttcttgtttgtttgc 502
Query: 304 ttgttttgctattatttgttgttttctataatggtctccatttgttgtgaggcaatgttt 363
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 503 ttgttttgctattatttgttgttttctataatgatctccatttgttgtgaggcaatgttt 562
Query: 364 cttgattaaggatgagaatggatgcttaacaaactatgaacaaacatga 412
|| ||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 563 ctcgattaaggatgagaatg-atgcttaacaaactatgaacaagcatga 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_h23.g1 MSMg01no400_h23.g1 CHROMAT_FILE:
MSMg01no400_h23.g1 PHD_FILE: MSMg01no400_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:50 2005
(394 letters)
>mm_chr14_117838039_117838833
Length = 795
Score = 679 bits (351), Expect = 0.0
Identities = 384/395 (97%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 1 ctctagggaagaactgtgggcatataataaggatgcgttcgactagacaggtgttttcaa 60
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 595 ctctagggaagaactgtgggcatataaaaaggatgtgttcgactagacaggtgttttcaa 536
Query: 61 tttgtttagctgaagtaggggtgttctattcagcgcagaaaagaatgacagatcccaaac 120
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 535 tttgtttagctgaagtaagggtgttatattcagcgcagaaaagaatgacagatcccaaac 476
Query: 121 actccatattttggcaattcttgtcatactcaaaactggaaatttatatagaaaatgaat 180
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 acttcatgttttggcaattcttgtcatactcaaaactggaaatttatatagaaaatgaat 416
Query: 181 cctagctcactgatcatagctattcattggagaatcctatgatgcgtcatctagagcttc 240
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 415 cctagctcactggtcatagctattcattggagaatccgatgatgcgtcatctagagcttc 356
Query: 241 agctgtagtcaaaaataaatttgccaaattttaaggctaggaaaagcatcatttgtatct 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 355 agctgtagtcaaaaataaatttgccaaattctaaggctaggaaaagcatcatttgtatct 296
Query: 301 gcaaaatggcaagcccaagttaaaaaaaa-ttctgttgaggatcacaaattaatcttcca 359
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 295 gcaaagtggcaagcccaagttaaaaaaaaattctgttgaggatcacaaattaatcttcca 236
Query: 360 ctctttgcaaagaaatttccccattatgttgtcaa 394
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ctctttgcaaagaaatttccccattatgttgtcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
