Query= MSMg01no400_i17.b1 MSMg01no400_i17.b1 CHROMAT_FILE:
MSMg01no400_i17.b1 PHD_FILE: MSMg01no400_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:53 2005
(481 letters)
>mm_chr14_85056326_85057208
Length = 883
Score = 895 bits (463), Expect = 0.0
Identities = 478/483 (98%), Gaps = 2/483 (0%)
Strand = Plus / Plus
Query: 1 aatgctttgtgtaggcttttatgtctccttacgtggggaatcttttgtatgctatactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgctttgtgtaggcttttatgtctccttacgtggggaatcttttgtatgctatactaa 260
Query: 61 gaagggaaagaattgga-tttttttttt-aatgctgcactttgttttaaacattttgtac 118
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gaagggaaagaattggacttttttttttcaatgctgcactttgttttaaacattttgtac 320
Query: 119 taaatatgtccccacaagggcagatgccatacagtcacagaatacgttaaacatatttac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatatgtccccacaagggcagatgccatacagtcacagaatacgttaaacatatttac 380
Query: 179 ttgttattgttgaagtgttaattgaccctggaagtcaattcaatatgtcaggatttgaaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgttattgttgaagtgttaattgaccctggaagtcaattcaatatgtcaggatttgaaa 440
Query: 239 aggcaattgctgttgggcagtgcatccgaggatgtctgatgcgtaatatctggagacatt 298
|||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 aggcaattgctgaggggcagtgcatccgaggatgtccgatgcgtaatatctggagacatt 500
Query: 299 tcaagactttggaagctcctttaattctaaacctcacctcacttctaccagaaatttcag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaagactttggaagctcctttaattctaaacctcacctcacttctaccagaaatttcag 560
Query: 359 agtgcaatataatgtgacagtgcaactttcctgttacccaaaggaaggtctgtgcagcac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgcaatataatgtgacagtgcaactttcctgttacccaaaggaaggtctgtgcagcac 620
Query: 419 attagttaacagtatagtattcagaagatgtcttctaatactccttttttgtctgggttt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attagttaacagtatagtattcagaagatgtcttctaatactccttttttgtctgggttt 680
Query: 479 ctt 481
|||
Sbjct: 681 ctt 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 883
Length adjustment: 10
Effective length of query: 471
Effective length of database: 873
Effective search space: 411183
Effective search space used: 411183
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_i17.g1 MSMg01no400_i17.g1 CHROMAT_FILE:
MSMg01no400_i17.g1 PHD_FILE: MSMg01no400_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:53 2005
(513 letters)
>mm_chr14_85202998_85203910
Length = 913
Score = 938 bits (485), Expect = 0.0
Identities = 506/513 (98%)
Strand = Plus / Minus
Query: 1 accataaaaaagatgattttcttaccatacgaaatgaagttagatttgtccttctaagcc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 713 accataaaaaagatgattttcttaccatacgaaatgaagtcagatttgtccttctaaacc 654
Query: 61 tagctcaaatattctgtcctctcttctttcgttttcctgttatccactacatctattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tagctcaaatattctgtcctctcttctttcgttttcctgttatccactacatctattcaa 594
Query: 121 tagaacatccatgcgattttagaagccaccttttcctttgatatcttattgcactctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tagaacatccatgcgattttagaagccaccttttcctttgatatcttattgcactctgct 534
Query: 181 ttatctaacttgtagtcttcaatttccttgaaacctccaacatatcctattgagctttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttatctaacttgtagtcttcaatttccttgaaacctccaacatatcctattgagctttat 474
Query: 241 atttgtatatttatataagataatgttgtacatgtggttaaaaattcaataaaatgaaat 300
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atttgtagatgtaaataagataatgttgtacatgtggttaaaaattcaataaaatgaaat 414
Query: 301 tattgaattagtcagtgaaagaaaacataaaagaagaaggaagagattcatgagcccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tattgaattagtcagtgaaagaaaacataaaagaagaaggaagagattcatgagcccact 354
Query: 361 tctatgtcaatattgggagactattgatggttagtaagtagccaaatatatgggaattca 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 353 tctatgtcaatattgggagactattgatggttagtaagtagtcaaatatatgggaattca 294
Query: 421 attaagtcaaacaacaagaaaagaaatcaagcaaaccagagatgctaatagctcagtttg 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 293 attaagtcaaacaacaagaaaagaaatcaagccaaccagagatgctaatagctcagtttg 234
Query: 481 ctctgcactattacaggacacataggaacagac 513
|||||||||||||||||||||||||||||||||
Sbjct: 233 ctctgcactattacaggacacataggaacagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
