Query= MSMg01no401_a24.b1 MSMg01no401_a24.b1 CHROMAT_FILE:
MSMg01no401_a24.b1 PHD_FILE: MSMg01no401_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:35 2005
(498 letters)
>mm_chr14_91434674_91435571
Length = 898
Score = 940 bits (486), Expect = 0.0
Identities = 492/494 (99%)
Strand = Plus / Minus
Query: 5 gaattcataaaactctcagagagttttttttttcattacctccctctaaaagaaatttga 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaattcataaaacgctaagagagttttttttttcattacctccctctaaaagaaatttga 666
Query: 65 acagttggtatgaacgtcagacctttgggtatcttaaattatttttttcttatttttaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 acagttggtatgaacgtcagacctttgggtatcttaaattatttttttcttatttttaaa 606
Query: 125 atatcagataattttaaatattgagtttatagttggatactataagataggattccctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atatcagataattttaaatattgagtttatagttggatactataagataggattccctaa 546
Query: 185 aatgatgagatgttttagtgggagaaatgatctgtcataaagctggagggtatgtgtcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aatgatgagatgttttagtgggagaaatgatctgtcataaagctggagggtatgtgtcta 486
Query: 245 attctgatgacctacatggtaggaaggaaaaaactctcaaccgtagcctatcctttgatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 attctgatgacctacatggtaggaaggaaaaaactctcaaccgtagcctatcctttgatc 426
Query: 305 tctatacacacaaggctgcatgtgccttcctgctccactcacatgatcactatgtaaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tctatacacacaaggctgcatgtgccttcctgctccactcacatgatcactatgtaaata 366
Query: 365 aataaagagtagagttgtggaagaagaagaagaagaaaaagaacttatttttaggatcgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aataaagagtagagttgtggaagaagaagaagaagaaaaagaacttatttttaggatcgg 306
Query: 425 ttgatttaaaatatctgcaatttgttagttacatagttatttcctttaaggaaacttgtt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttgatttaaaatatctgcaatttgttagttacatagttatttcctttaaggaaacttgtt 246
Query: 485 tcaaaatctaccca 498
||||||||||||||
Sbjct: 245 tcaaaatctaccca 232
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_a24.g1 MSMg01no401_a24.g1 CHROMAT_FILE:
MSMg01no401_a24.g1 PHD_FILE: MSMg01no401_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:36 2005
(279 letters)
>mm_chr14_91264266_91264944
Length = 679
Score = 532 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Plus
Query: 1 ttcatagctcctatagataggatatgaatgacatcctcatgtttgatatttttaaatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatagctcctatagataggatatgaatgacatcctcatgtttgatatttttaaatgcc 260
Query: 61 ccataatatttctttgtaactagttttaatggtttttattttacaagattgataacaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccataatatttctttgtaactagttttaatggtttttattttacaagattgataacaatt 320
Query: 121 caaaatttgtaaaaaatgtaatgtaaaattttgtgttttatacatatatgtgtatatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaatttgtaaaaaatgtaatgtaaaattttgtgttttatacatatatgtgtatatatg 380
Query: 181 tgtgtgtatatgcatatatgtatacatatacacatacatatgtatgtatgtatatatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtgtatatgcatatatgtatacatatacacatacatatgtatgtatgtatatatata 440
Query: 241 tatatatatatatatatatagagagagagagagagagag 279
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tatatatatatatatatatatagagagagagagagagag 479
Score = 58.7 bits (30), Expect = 4e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 231 tatatatatatatatatatatatatatata 260
||||||||||||||||||||||||||||||
Sbjct: 460 tatatatatatatatatatatatatatata 431
Score = 58.7 bits (30), Expect = 4e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 231 tatatatatatatatatatatatatatata 260
||||||||||||||||||||||||||||||
Sbjct: 462 tatatatatatatatatatatatatatata 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 3
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
