TATCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGCATCCGCGG
AATTCCTGATCTTTCAAGACTTTTATCATGAATGGGTGTTGGATCTTGTC
AAATGCATTTTCTGCATCTAATTAGATGATCATGTGGTTTTTGTCTTTGA
GTTTGTTTATATAATGGATTACATTGATGGATTTTCGTATATTAAACCAT
CCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTT
AATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCAT
CGATATTCATAAGATATTTTTTTCTGAAGTTCTCTATCTTTGTTGGGTCT
TTCTGTGGTTTAGGTATCGGAGTAATAGTGGCTTCATAAAATGAGTTGGG
TAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTTGTGCAGAACTGGAA
TTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCATCTGGT
CCTGGGCTTTTTTTGGTTGGGAGACTATTAATAACTGCTTCTATTTCTTT
AGGTGATATGGGACCGTTTAGATGGTCAACTTGATCCTGATTCAACTTTG
GTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTCCAGT
TTTGTTGAGCATAGCCTCTTGTAGAAGGATTTGATGGTGTTTTGGATTAC
TTCCGGATTTGTTGGTATGCCTCCTTTTTCCTTCTTAAC

TTCGGATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAACAAATTGAAAACATTTT
TTTCAGCTGAAGAGACAAAGAGGTAAAAAGGGATTACTCTCCCACAAACT
TTCCTGACAAAGCTCTAGGCTTCTCCCCAATATATTCTCTATGCATTTAT
TAATGCTTCTATGCATTTATTAATGTCTTTGTGTTATGATTCTCCTCAGA
TGAAAAAACATGCCAAGAAGAAAATGATGTCTCATTTCTAAATAGGAAAT
TTCTACCAACAAGCCTTCTTATTATGTTTAGACTCAGGAAATATTACAGA
AGTTAAACAAAGCCAATGTTAAAACCAGAAACTCTGAAGTGCAGTGAAAT
GCTACCATATCTATAATGGGTGGCTGTAGCTCTCTGTCTCTCTCTCATGA
GCTCCTAGGACCATTGACCACCTACCCTAAGCCAGCTCAAGATCAAACCA
GCAGAAGTTCTGGCATTGATAGGGCAGGCACTCTTTAGGCTTCATCCATT
AATTATGAGCTTTGGTAGTTCATAGAACTATTAGTGGAAGGAACCATTTT
TAAACTGTTCCTATTGTTATCTTAGTCCTATTCTAAAGTGTGGCCCCATA
TGCATGCACATGTATGCTAGAAGCATACAATTAACATTGCAAAAGAACTT
GCCTTCATGCTTTCAAAAAATATGCAAAATTCCTATGTGTAGCAACACAT
GC

Query= MSMg01no401_e17.g1 MSMg01no401_e17.g1 CHROMAT_FILE:
MSMg01no401_e17.g1 PHD_FILE: MSMg01no401_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:53 2005
         (575 letters)



>mm_chr14_88706287_88707261
          Length = 975

 Score = 1089 bits (563), Expect = 0.0
 Identities = 572/575 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaacaaattgaaaacatttttttcagctgaagagacaaagaggtaaaaagggattactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaacaaattgaaaacatttttttcagctgaagagacaaagaggtaaaaagggattactc 260

                                                                       
Query: 61  tcccacaaactttcctgacaaagctctaggcttctccccaatatattctctatgcattta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccacaaactttcctgacaaagctctaggcttctccccaatatattctctatgcattta 320

                                                                       
Query: 121 ttaatgcttctatgcatttattaatgtctttgtgttatgattctcctcagatgaaaaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatgcttctatgcatttattaatgtctttgtgttatgattctcctcagatgaaaaaac 380

                                                                       
Query: 181 atgccaagaagaaaatgatgtctcatttctaaataggaaatttctaccaacaagccttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgccaagaagaaaatgatgtctcatttctaaataggaaatttctaccaacaagccttct 440

                                                                       
Query: 241 tattatgtttagactcaggaaatattacagaagttaaacaaagccaatgttaaaaccaga 300
           |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattatgccaagactcaggaaatattacagaagttaaacaaagccaatgttaaaaccaga 500

                                                                       
Query: 301 aactctgaagtgcagtgaaatgctaccatatctataatgggtggctgtagctctctgtct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactctgaagtgcagtgaaatgctaccatatctataatgggtggctgtagctctctgtct 560

                                                                       
Query: 361 ctctctcatgagctcctaggaccattgaccacctaccctaagccagctcaagatcaaacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctctcatgagctcctaggaccattgaccacctaccctaagccagctcaagatcaaacc 620

                                                                       
Query: 421 agcagaagttctggcattgatagggcaggcactctttaggcttcatccattaattatgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcagaagttctggcattgatagggcaggcactctttaggcttcatccattaattatgag 680

                                                                       
Query: 481 ctttggtagttcatagaactattagtggaaggaaccatttttaaactgttcctattgtta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttggtagttcatagaactattagtggaaggaaccatttttaaactgttcctattgtta 740

                                              
Query: 541 tcttagtcctattctaaagtgtggccccatatgca 575
           |||||||||||||||||||||||||||||||||||
Sbjct: 741 tcttagtcctattctaaagtgtggccccatatgca 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)