Query= MSMg01no405_j03.b1 MSMg01no405_j03.b1 CHROMAT_FILE:
MSMg01no405_j03.b1 PHD_FILE: MSMg01no405_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:36 2005
(517 letters)
>mm_chr14_38901362_38902282
Length = 921
Score = 949 bits (491), Expect = 0.0
Identities = 512/521 (98%), Gaps = 4/521 (0%)
Strand = Plus / Plus
Query: 1 caaacacttgttaaattattcacagtgctgctttctatgaataattagattacctgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaacacttgttaaattattcacagtgctgctttctatgaataattagattacctgctgc 260
Query: 61 ctacatcaggtgggagactgtagcaccaacacttaaggatttacagtgttttgtatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacatcaggtgggagactgtagcaccaacacttaaggatttacagtgttttgtatgcag 320
Query: 121 tttgcattatttttccctagactaatgtagcccatagttggggaagagaataagttctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgcattatttttccctagactaatgtagcccatagttggggaagagaataagttctat 380
Query: 181 tctgaaagcaatttatgaaacgagctttgtgttgacagagattgcaatttcagaaaaggt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tctgaaagcaatttatgaaacgagctttgtgttgacagagattgcaatttcagagaaggt 440
Query: 241 gatcaaatattttctgttgacaggtttacgttcagtgaaaaccacagggaaatgaaaaca 300
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatcaaagaaattctgttgacaggtttacgttcagtgaaaaccacagggaaatgaaaaca 500
Query: 301 cactctagcatttttttttt----ggtaaagaaaaaaggggatataactagcatataagg 356
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactctagcattttttttttttttggtaaagaaaaaaggggatataactagcatataagg 560
Query: 357 taacgtttctgtgatggggtgtatctgtgcgatttctttgggtgtggcaatgctagagag 416
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 taacgtttctgtgatggggtgtatctttgcgatttctttgggtgtggcaatgctagagag 620
Query: 417 gaattagtgagagaacactggtgacaagtgaggtcagaaagttttcctttgtgcattctg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattagtgagagaacactggtgacaagtgaggtcagaaagttttcctttgtgcattctg 680
Query: 477 gggacaggtctcaggaagctcagactggcttcaaacatagc 517
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggacaggtctcaggaagctcagactggcttcaaacatagc 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 921
Length adjustment: 10
Effective length of query: 507
Effective length of database: 911
Effective search space: 461877
Effective search space used: 461877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_j03.g1 MSMg01no405_j03.g1 CHROMAT_FILE:
MSMg01no405_j03.g1 PHD_FILE: MSMg01no405_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:36 2005
(523 letters)
>mm_chr14_39067677_39068600
Length = 924
Score = 719 bits (372), Expect = 0.0
Identities = 398/410 (97%), Gaps = 6/410 (1%)
Strand = Plus / Minus
Query: 120 aaaattaaaatcctggtaaaaaatctggtaaacaaatacatgaaggtagatagtggtggc 179
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 924 aaaattaaaatcctggtaaaaagtctggtaaacaaatacatgaaggtagatagtggtggc 865
Query: 180 acatgcttttaatcccagcacttgggaggtagatgcagacatttcttactgaattctaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 acatgcttttaatcccagcacttgggaggtagatgcagacatttcttactgaattctaaa 805
Query: 240 ccatcctatctacagagtcaggtctaggacagctaaagctaaaagagttaaactgtgtcc 299
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 804 ccatcctatctacagagtcaggtctaggacagctaaaggtaaaagagttaaactgtgtac 745
Query: 300 tgaaaaacaaaacagaacataacaaaacaaaaaaa------gaaagctacttgagcaagt 353
||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 744 tgaaaaacaaaacagaacaaaacaaaacaaaaaaaaaaaaagaaagctacttgagcaagt 685
Query: 354 accatgttccttatgaaattgcatatatgtcatgccacatgacaaaatacatttaagttt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 accatgttccttatgaaattgcatatatgtcatgccacatgacaaaatacatttaagttt 625
Query: 414 tgtacatccagattcacatttattgttacataagtatattgtgaaatacatgtatatatc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtacatccagattcacatttattgttacataagtatattgtgaaatacatgtatatatc 565
Query: 474 ttatacgtgtgaaaggatagtggcagacacttaaattatgtagggtatag 523
||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 564 ttatatgtgtgaaaggatagtggcagacactcaaattatgtagggtatag 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space: 468882
Effective search space used: 468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
