Query= MSMg01no407_h22.b1 MSMg01no407_h22.b1 CHROMAT_FILE:
MSMg01no407_h22.b1 PHD_FILE: MSMg01no407_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:09 2005
(464 letters)
>mm_chr14_10476469_10477328
Length = 860
Score = 839 bits (434), Expect = 0.0
Identities = 452/460 (98%), Gaps = 4/460 (0%)
Strand = Plus / Minus
Query: 5 gaattctccctgctggtgaacttaagttaagtaagtttaatgtggtgtaatttaattact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gaattctccctgctggtgaacttaagttaagtaagtttaatgtggtgtaatttaattact 601
Query: 65 aagcatagttttcttctcagtgggaagagataccaggtttttgctaagaacaaaaggaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aagcatagttttcttctcagtgggaagagataccaggtttttgctaagaacaaaaggaag 541
Query: 125 gctgtaaatagccctcagtgatggctggctactaagggggaaaaaaatctaagagcattc 184
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 540 gctgtaaatagccctcagtgatggctggttactaaggggg----aaatctaagagcattc 485
Query: 185 agctgtcttttgcataatgtttgagggtagatgcatcctggactcattgtaaattttatt 244
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 484 agctgtcttctgcataatgtttgagggtagatgcatcctgaactcattgtaaattttatt 425
Query: 245 taattaatgctttgaggattaacagcaaagcagaccttgcagcccggaatataaagcttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 taattaatgctttgaggattaacagcaaagcagaccttgcagcccggaatataaagcttc 365
Query: 305 tgggattacccagaaagtgattttccccagaaaggatgtccccattaataattaatgcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgggattacccagaaagtgattttccccagaaaggatgtccccattaataattaatgcca 305
Query: 365 ggcgttttcataaatgtcagattcccactgcaagcagcaacttgaccctcagtaataaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggcgttttcataaatgtcagattcccactgcaagcagcaacttgaccctcagtaataaac 245
Query: 425 catttaagattcattaaagggaagcatcattcttaaactg 464
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 244 catttaagattcattaaagagaagcatcattcttaaactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 860
Length adjustment: 10
Effective length of query: 454
Effective length of database: 850
Effective search space: 385900
Effective search space used: 385900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_h22.g1 MSMg01no407_h22.g1 CHROMAT_FILE:
MSMg01no407_h22.g1 PHD_FILE: MSMg01no407_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:09 2005
(397 letters)
>mm_chr14_10298336_10299132
Length = 797
Score = 723 bits (374), Expect = 0.0
Identities = 391/397 (98%)
Strand = Plus / Plus
Query: 1 catttcaggaagcacaaacataaaatagtaggacagaaaagtctcttaccaattctatgc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 catttcaggaagcacaaacataaaagagtaggacagaaaagtctcttaccaattctatgc 260
Query: 61 acaaggacttaggagttctttcttaggtgctgggaacagatggaaaatacatacttcttg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 acaaggacttaggagttctttcttaggagctgggaacagatggaaaatacatacttcttg 320
Query: 121 tgatatctaaacatcacaacaattttaaatacatacatcctgaaagtcagagtccttcta 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatatctaaatatcacaacaattttaaatacatacatcctgaaagtcagagtccttcta 380
Query: 181 ctgggatttgaccgctaactagctatagccccatgtgttaatccagaatgtcatgctcac 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgggatttgaccgctaactagccatagccccatgtgttaatccagaatgtcatgctcac 440
Query: 241 tgaaatcccacaggcctgccagtattcacacgaactttccatgaagaatgctctcccagc 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tgaaatcccacaggcctgccagtattcacatgaactttccatgaagaatgctctcccagc 500
Query: 301 cagccttggccaattcactttttctacatccacagagagcaagtatatgctgctctctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagccttggccaattcactttttctacatccacagagagcaagtatatgctgctctctgc 560
Query: 361 aagcttgctctcgaatagcgaanattaagaaaacaca 397
|||||||||||||||||||||| ||||||||||||||
Sbjct: 561 aagcttgctctcgaatagcgaaaattaagaaaacaca 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
