Query= MSMg01no407_i24.b1 MSMg01no407_i24.b1 CHROMAT_FILE:
MSMg01no407_i24.b1 PHD_FILE: MSMg01no407_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:14 2005
(547 letters)
>mm_chr14_108218681_108219627
Length = 947
Score = 833 bits (431), Expect = 0.0
Identities = 454/463 (98%), Gaps = 4/463 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaacttgaggtcatatatccagattattgcctttttctaaaataaaataattc 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 461 gaattcttaacttgaggtcatatatacagattattgcctttttctaaaataaaataattc 402
Query: 65 atgtaaaaatttcatgtaaatgagtattaaatgacttgtgcattcatagtgctcccagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atgtaaaaatttcatgtaaatgagtattaaatgacttgtgcattcatagtgctcccagag 342
Query: 125 tctctattttaaattatattagggaacatttaaatttgcttttgttcaaaggccacagta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tctctattttaaattatattagggaacatttaaatttgcttttgttcaaaggccacagta 282
Query: 185 gtgtaatggctattatttcttgtctgcttaactacatcgaaaatattctaaagaccaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gtgtaatggctattatttcttgtctgcttaactacatcgaaaatattctaaagaccaact 222
Query: 245 aagagttctagtgaaatacaaac--acacacacacacacacacacacacacacacacaca 302
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 221 aagagttctagtgaaatacaaacatacacacacacacacacacacacacacacacacaca 162
Query: 303 cacacacacacacttatacacacacgattctgtaagtgagagtggagatgtgtgggagga 362
||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||
Sbjct: 161 cacacacacacacttat--acacacgattctgtaagttagagtgcagatgtgtgggagga 104
Query: 363 atctgtaaggtctgagaactatgaatcctaagattctgaaggatttatctcacctgagga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atctgtaaggtctgagaactatgaatcctaagattctgaaggatttatctcacctgagga 44
Query: 423 cgtggtatttccacccttggtggaaggcacacattcactccaa 465
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 43 agtggtatttccacctttggtggaaggcacacattcactccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_i24.g1 MSMg01no407_i24.g1 CHROMAT_FILE:
MSMg01no407_i24.g1 PHD_FILE: MSMg01no407_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:14 2005
(481 letters)
>mm_chr14_108060510_108061390
Length = 881
Score = 832 bits (430), Expect = 0.0
Identities = 436/438 (99%)
Strand = Plus / Plus
Query: 1 tttatatattttgaatattagctctctgtcatatgtaagatggtgaagatcttttcctaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaatattttgaatattagctctctgtcatatgtaagatggtgaagatcttttcctaa 260
Query: 61 tctgttacctgtcattttgtcttcttgcagtgtgatgggtgattttcaaagaacaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgttacctgtcattttgtcttcttgcagtgtgatgggtgattttcaaagaacaagcat 320
Query: 121 gggcatatattataatgtcatatcacaccacttgttggctcttcaaaaagcagtgggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcatatattataatgtcatatcacaccacttgttggctcttcaaaaagcagtgggggt 380
Query: 181 taagaataatggaggttttcaactcaagataaatgtgcataaccagaaataggaatagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagaataatggaggttttcaactcaagataaatgtgcataaccagaaataggaatagaa 440
Query: 241 tataatgccacgggttaatttttggtattaacaatgatgagatactgagaagtttcagaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataatgccacaggttaatttttggtattaacaatgatgagatactgagaagtttcagaa 500
Query: 301 aataccttttagcctgaagcactcctaaatgttaggtagaaagtcatgttttaaatttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataccttttagcctgaagcactcctaaatgttaggtagaaagtcatgttttaaatttac 560
Query: 361 acataagtcaatgcccaaaaattcaaatataatgtggaaacaaatacatatgattttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acataagtcaatgcccaaaaattcaaatataatgtggaaacaaatacatatgattttttg 620
Query: 421 attaagatatatatatat 438
||||||||||||||||||
Sbjct: 621 attaagatatatatatat 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
