Query= MSMg01no408_g22.b1 MSMg01no408_g22.b1 CHROMAT_FILE:
MSMg01no408_g22.b1 PHD_FILE: MSMg01no408_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:24 2005
(434 letters)
>mm_chr14_31763434_31764269
Length = 836
Score = 779 bits (403), Expect = 0.0
Identities = 428/439 (97%), Gaps = 7/439 (1%)
Strand = Plus / Plus
Query: 3 cggaattccttagaaaaatgaaaaaaattacaaaggtttgggagcatgttactattacat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattccttagaaaaatgaaaaaaattacaaaggtttgggagcatgttactattacat 262
Query: 63 ggctgtaaactcaacacac--gagtaggattgcaagatgagctgtagaggaagatcttat 120
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggctgtaaactcaacacacaagagtaggattgcaagatgagctgtagaggaagatcttat 322
Query: 121 ctcaacaacagtgacataataataataa---ataataacagttggtcattgtaaaagcaa 177
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 323 ctcaacaacagtaacataataataataataaataataacagttggtcattgtaaaagcaa 382
Query: 178 ttacaatttactagttggcaattatagaagatgggattatatcttcccacacaaaatggg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttacaatttactagttggcaattatagaagatgggattatatcttcccacacaaaatggg 442
Query: 238 aaacagacgccaaaattttttgatgatttacatttcaaaggaagggctttctgtcctgga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaacagacgccaaaattttttgatgatttacatttcaaaggaagggctttctgtcctgga 502
Query: 298 ggaaaacatttctggcttgtagaagacatatgcatatatatctcaacgggtcagagggat 357
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 503 ggaaaacatttctggcttgtagaagacatatgcatatatatctcaacgggacagagggat 562
Query: 358 aatgagtaactgtgcgcctgtttaaaagtaaattcttcaggcaaggctggtagct--ttt 415
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 563 aatgagtaactgtgcgcctgtttaaaagtaaattcttcaggcaaggcaggtagctctttt 622
Query: 416 cggagccttgtgcattcac 434
|| ||||||||||||||||
Sbjct: 623 cgcagccttgtgcattcac 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 836
Length adjustment: 9
Effective length of query: 425
Effective length of database: 827
Effective search space: 351475
Effective search space used: 351475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_g22.g1 MSMg01no408_g22.g1 CHROMAT_FILE:
MSMg01no408_g22.g1 PHD_FILE: MSMg01no408_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:24 2005
(435 letters)
>mm_chr14_31976083_31976917
Length = 835
Score = 841 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Minus
Query: 1 agtgtgaggagggtgacggccacaagtgcccaccaccccacggcctgcctaccctctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agtgtgaggagggtgacggccacaagtgcccaccaccccacggcctgcctaccctctctc 576
Query: 61 ctagctatgagttgcagctcaggggcgccgcgatatccttaagtggctgcagccaggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ctagctatgagttgcagctcaggggcgccgcgatatccttaagtggctgcagccaggaat 516
Query: 121 gctggaaggatgtggttcagaaggcctgctgccccggctactggggatcccagtgctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gctggaaggatgtggttcagaaggcctgctgccccggctactggggatcccagtgctttg 456
Query: 181 gtatggatggacgaggctgcttgccctgccccagtcaccctatgccccagctcccaatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtatggatggacgaggctgcttgccctgccccagtcaccctatgccccagctcccaatcc 396
Query: 241 tcatctgaggggcacccacattgccctcaaccttcttcaaccagtgactactcattgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tcatctgaggggcacccacattgccctcaaccttcttcaaccagtgactactcattgaga 336
Query: 301 gccttgagggaatggctccctagccttggctgccctgggggaggggctggaggagaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gccttgagggaatggctccctagccttggctgccctgggggaggggctggaggagaggta 276
Query: 361 aaggaagcattctgggaaaaaagctgagcttttggggtccacagagtgccctggtggtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaggaagcattctgggaaaaaagctgagcttttggggtccacagagtgccctggtggtcc 216
Query: 421 ggcgacaccgtgtag 435
|||||||||||||||
Sbjct: 215 ggcgacaccgtgtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
