Query= MSMg01no408_p13.b1 MSMg01no408_p13.b1 CHROMAT_FILE:
MSMg01no408_p13.b1 PHD_FILE: MSMg01no408_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:09 2005
(609 letters)
>mm_chr14_33740731_33741740
Length = 1010
Score = 1087 bits (562), Expect = 0.0
Identities = 595/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgacttacctaggctagatggccagtgagtttcagggatctgtttgtctctg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 gaattcactgacttagctaggctagatggccagtgagtttcagggatctgtttgtctctg 932
Query: 65 cctcacactgcaatcaagctggttaaaaatgtgctgcaccacgtctgactgtgtgtgcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 931 cctcacactgcaatcaagctggttaaaaatgtgctgcaccacgtctgactgtgtgtgtat 872
Query: 125 gtgtatgtgaatttgtatgcatgtatagtatatgtgtatgtacatctgtatgcaggtaca 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gtgtatgtgaacttgtatgcatgtatagtatatgtgtatgtacatctgtatgcaggtaca 812
Query: 185 cataaaagcctgagattgacagtaagagtcttcactattgttctacaaagtatcc-ttta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 811 cataaaagcctgagattgacagtaagagtcttcactattgttctacaaagtatcctttta 752
Query: 244 tgactagtgctctcactaagcccagagttcactaattgattatactggttggctgtgact 303
||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 751 agactagtgctctcactaagcccagagttcactaattgattacactagctggctgtgact 692
Query: 304 ggggcatctgccaatctctgtcctgcctggccctcagcacctgggttacatgtgtgtaca 363
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 691 ggggcatctgcccatctctgtcctgcctggccctcagcgtctgggttacatgtgtgtaca 632
Query: 364 aatgtttgccttctatgtcagtttctgggagttgaactcaagcctcaaggctttcaagat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aatgtttgccttctatgtcagtttctgggagttgaactcaagcctcaaggctttcaagat 572
Query: 424 gagaaatttactggcaaatttatcttcccagcccagaatgtgcatttaattgtgtgaatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gagaaatttactggcaaatttatcttcccagcccagaatgtgcatttaattgtgtgaatt 512
Query: 484 gattaagacaataaaagaaaaccatcctgtcatcatttaaaaaatgctcccagagctgtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gattaagacaataaaagaaaaccatcctgtcatcatttaaaaaatgctcccagagctgtc 452
Query: 544 tcctaccttaggaagaaggcccagaactgtccctcatgaactcctttctctctttcaatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcctaccttaggaagaaggcccagaactgtccctcatgaactcctttctctctttcaatc 392
Query: 604 cctctg 609
||||||
Sbjct: 391 cctctg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space: 599000
Effective search space used: 599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_p13.g1 MSMg01no408_p13.g1 CHROMAT_FILE:
MSMg01no408_p13.g1 PHD_FILE: MSMg01no408_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:09 2005
(117 letters)
>mm_chr14_33578109_33578624
Length = 516
Score = 180 bits (93), Expect = 3e-50
Identities = 111/117 (94%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 1 aatactagggaagctcagatgtttctgtgcacagaagaatgggtgtgtctgtagagctgg 60
|||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 201 aatactagagaagctcagatgtttctgtgcagaggagaatgggtgtgtctgtagagctgg 260
Query: 61 cagaaaaaccacacagttcttagttattttaacttagtgatgggggggagggggtaa 117
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 cagaaaagccacacagttcttagttattttaacttagtgatggggga-agggggtaa 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 516
Length adjustment: 8
Effective length of query: 109
Effective length of database: 508
Effective search space: 55372
Effective search space used: 55372
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
