ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCCACTCATGAGAAAAACTATGGGGACAAACCAGTTAAAGTGCACAATT
TTGAATCTTAATACCATAACCAACTCAATTTTAAAAATTGGCATCTTTTC
TTATATATGTCTCTGTGATTTCCATCTGCCTTCTCTATAATACATACATG
TAAAAGTATACATGATCGAGGCAGGTATCAATGAATAATACATGTTTCTA
TAAAAACATAGAATTTTCCTGTATACATTTTTTTCATATATTAAGAAATC
TAGATGTAGCAACATTACATCAGATCTTGTTCATTATGGGTAAGGAGGCA
GAAATAATAGATGACTACCAGACTCAAATATAATAATTTAGTGAGAAAGA
AAGAGTGATTTCTCAAAAGAGGGCCATTCAGTCGTAAAAAGAATGGTAAG
CAAACTTGCTGTGATAAGCATGCACGTGAATGTGTGCATGAACATACAAA
CATATGCCTACTTTCTCAGNCTCCTATACTCATCTTATTTTTACCATTGT
TTCACACTGACTAGCCTATGGTCCAGAGCAGAATTTATTTCCCTCTCTTG
CTGGTCTCTAAGAGAGCTCGTTTATTCCTTTACTTCTAAAATTCCCTTTA
ACACGAACGCCAAAAATGTTTAATTTTTGCTTCTGGGTTGCCCTTGAACC
TTAATTTTTACCCAAAAATTTTTCTACGTTATAAACCTTCAGCTTAAATC
TNTGGGCCCGACTTACTTATTATTTCTCTCTAACAGGTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAAT
GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA
TTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAG
CAGATGCTGGCGAGGATGTGGAGAAATAGGAACACTCCTCCATTGTTGGT
GGGAGTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTC
AGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGG
CATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTA
TGTTCATAGCAGCCTTACTTATAATAGCCAGATGCTGGAAAGAACCCAGA
TGCCCCTCAACAGAGGAATGGATACTGAATATGTGGTACATCTACCCAAT
GGAGTATCTACTTCGCTATTAATAATGAACGGATTTATGAAATTTCTAAT
TCAACGTATGGTCCCGGATGTGATCTTCCTGGGCTGAGGGAACTTTCTTT
AAGGTCTCTCCCTACATGTACTCCCTGGTGTATTGTGCATTTTGTTTCAC
TTTTTTCCCTTCTTTATATAAGAACTATTTCTTATTTCTATCTATCCCTT
AAACCAGTTATTGTTTTTGTTTTTAATCTTTCTCCGTTTCACTTTGCTAT
GATCTTTCTTCTGGTGT

Query= MSMg01no409_n06.b1 MSMg01no409_n06.b1 CHROMAT_FILE:
MSMg01no409_n06.b1 PHD_FILE: MSMg01no409_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:20 2005
         (509 letters)



>mm_chr14_109562645_109563552
          Length = 908

 Score =  826 bits (427), Expect = 0.0
 Identities = 486/506 (96%), Gaps = 3/506 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcccactcatgagaaaaactatggggacaaaccagttaaagtgcacaattttgaat 64
           ||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 205 gaattcccactcacgagaaaaactatggggacaaaccagttaaagtgcatgattttgaat 264

                                                                       
Query: 65  cttaataccataaccaactcaattttaaaaattggcatcttttcttatatatgtctctgt 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 265 cttaataccataaccaactcaattttaaaaatcggcatcttttcttatatatgcctctgt 324

                                                                       
Query: 125 gatttccatctgccttctctataatacatacatgtaaaagtatacatgatcgaggcaggt 184
           ||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||  |
Sbjct: 325 gatttccatatgctttgtctataatacatacatgtaaaagtatacatgattgaggcat-t 383

                                                                       
Query: 185 atcaatgaataatacatgtttctataaaaacatagaattttcctgtatacatttttttca 244
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 atcaatgaataatacatgtttctataaaaacatagacttttcctgtatacatttttttca 443

                                                                       
Query: 245 tatattaagaaa-tctagatgtagcaacattacatcagatcttgttcattatgggtaagg 303
           |||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 444 tatattaa-aaactctagatgtaacaacattacatcagatctttttcattatgggtaagg 502

                                                                       
Query: 304 aggcagaaataatagatgactaccagactcaaatataataatttagtgagaaagaaagag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggcagaaataatagatgactaccagactcaaatataataatttagtgagaaagaaagag 562

                                                                       
Query: 364 tgatttctcaaaagagggccattcagtcgtaaaaagaatggtaagcaaacttgctgtgat 423
           |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 563 tgatttctcaaaagagggccattcagtcataaaaagaatggtaaacaaacttgctgtgat 622

                                                                       
Query: 424 aagcatgcacgtgaatgtgtgcatgaacatacaaacatatgcctactttctcagnctcct 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 623 aagcatgcacgtgaatgtgtgcatgaacatacaaacatatgcctactttctcagtctcct 682

                                     
Query: 484 atactcatcttatttttaccattgtt 509
           |||||||||||||||||| |||||||
Sbjct: 683 atactcatcttatttttatcattgtt 708


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 908
Length adjustment: 10
Effective length of query: 499
Effective length of database: 898
Effective search space:   448102
Effective search space used:   448102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)