Query= MSMg01no410_e01.b1 MSMg01no410_e01.b1 CHROMAT_FILE:
MSMg01no410_e01.b1 PHD_FILE: MSMg01no410_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:56 2005
(598 letters)
>mm_chr14_11612307_11613300
Length = 994
Score = 1073 bits (555), Expect = 0.0
Identities = 584/601 (97%), Gaps = 13/601 (2%)
Strand = Plus / Plus
Query: 7 ccacagacctgactccctctcctcatcgcccattacattctattttcttcatgctcccag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ccacagacctgactccctctcctcatcgcccattacattctattttcttcatgctcccag 257
Query: 67 tgatgtcatctcccaacgcacagcatctactgtcctctctcaggcgcagagacaagcacc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgatgtcatctcccaacgcacagcatctactgtcctctctcaggcgcagagacaagcacc 317
Query: 127 atcccagatgcccatgaatattcttgcctcgtgaatacctgccataaatggcttctgcga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atcccagatgcccatgaatattcttgcctcgtgaatacctgccataaatggcttctgcga 377
Query: 187 gtgtatttcactttcacacagaggtgaagcctaccctgtgcctcttcaaaaccagcttcc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtgtatttcactttcacacagaggtgaagcctaccctgtgcctcttcaaaaccagcttcc 437
Query: 247 cagcttgctgcataatgctgccccaatgcactcttctcttctttgtataatgtcacacta 306
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cagcttgctgcagaatgctgccccaatgcactcttctcttctttgtataatgtcacacta 497
Query: 307 gtgattggttatttaatggctattcactctacg---------ttgtaaggttcgtgaagg 357
||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 498 gtgattggttatttaatggctattcactctagggattagccattgtaaggttcgtgaagg 557
Query: 358 caggggccatgtctttcttgttcactcagtttgtagcacataataaaactccatgtgtgc 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 558 caggggccatgtctttcttgttcactcagcttgtagcacataataaaactccatgtgtgc 617
Query: 418 atagtgaaggactagttgtagtttatgtttgtgctgtcaccactttgcagggtaggggaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atagtgaaggactagttgtagtttatgtttgtgctgtcaccactttgcagggtaggggaa 677
Query: 478 taaccacactcaagagcacagatgagaagtatactcaggaaatcaaaacagtacaaacag 537
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 678 taaccacactcaagagcacagatgagaagtatactcaggaaatcagaacag----aacag 733
Query: 538 ttgtcagagaaggctttaatcactagatacacctgccaccgttttagttaggcattaatg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttgtcagagaaggctttaatcactagatacacctgccaccgttttagttaggcattaatg 793
Query: 598 g 598
|
Sbjct: 794 g 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 994
Length adjustment: 10
Effective length of query: 588
Effective length of database: 984
Effective search space: 578592
Effective search space used: 578592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_e01.g1 MSMg01no410_e01.g1 CHROMAT_FILE:
MSMg01no410_e01.g1 PHD_FILE: MSMg01no410_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:56 2005
(495 letters)
>mm_chr14_11776132_11777028
Length = 897
Score = 895 bits (463), Expect = 0.0
Identities = 488/497 (98%), Gaps = 2/497 (0%)
Strand = Plus / Minus
Query: 1 cctagtccttagtggtggctaacattccaggtttcagagtttgggatcaggattctcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cctagtccttagtggtggctaacattccaggtttcagagtttgggatcaggattctcagc 638
Query: 61 cctgacagtggctagtgttccagctc--gagcacagatgtctgagacccttcatccttaa 118
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 637 cctgacagtggctagtgttccagctctggagcacagatgtttgagacccttcatccttaa 578
Query: 119 ggcctgaccatcttatggcacccttacagtggcaaggacttccagtggctatttttcagc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 577 ggcctgaccatcttatggcacccttacagtggcaaggacttccagtggctattatacagc 518
Query: 179 cacacagttctctttagctgcagctttctgcattccgtttcttccaccatcacttactat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cacacagttctctttagctgcagctttctgcattccgtttcttccaccatcacttactat 458
Query: 239 gtgaggcatggccactctgaaatccttagactgcctgtccctgttatggccactgtcaga 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtgaggcatggccactctgaaatccttagactgcctgtccctgttatggccactgtcaga 398
Query: 299 ttgctgctgtggcttcactgttgctgctgcagctgcggccacactggccactgcttcact 358
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 397 ttgcttctgtggcttcactgttgctgctgcagctgcgaccacactggccactgcttcact 338
Query: 359 ggcacatctctgctgctgtgcttcctgccaccatggctcttagagacactgcttcttctt 418
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggcacatctctgatgctgtgcttcctgccaccatggctcttagagacactgcttcttctt 278
Query: 419 ccttcatgttgtcacctcagtcaaccctgggaatagtagagatcaaaaatgaggaagaaa 478
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 277 ccttcatgttgtcacctcagtcaaccctgggaatggtagagatcaaaaatgaggaagaaa 218
Query: 479 ataccaccagaagcctt 495
|||||||||||||||||
Sbjct: 217 ataccaccagaagcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 897
Length adjustment: 10
Effective length of query: 485
Effective length of database: 887
Effective search space: 430195
Effective search space used: 430195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
