Query= MSMg01no410_i11.b1 MSMg01no410_i11.b1 CHROMAT_FILE:
MSMg01no410_i11.b1 PHD_FILE: MSMg01no410_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:17 2005
(235 letters)
>mm_chr14_15828952_15829584
Length = 633
Score = 340 bits (176), Expect = 3e-98
Identities = 223/244 (91%), Gaps = 11/244 (4%)
Strand = Plus / Minus
Query: 1 tctgacaggtatatgtagagaagtatataaaaacatgtatgcaacaacaggcaatgcaga 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 336 tctgacaggtatatgtagagaagtatataaaaacat-tatgcaacaacaggcaatgcag- 279
Query: 61 agatggcaccatgaaaagtgtcaaaagtggtggacaacttcacccaagtggctcaaaagc 120
||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||
Sbjct: 278 agatggcaccatgaaaagtgttagaagtggtggacaacttcatccaagtggcacaaaagc 219
Query: 121 taggagattctttttttttttttttttttt---------gagacagggtttctctgtgtt 171
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 218 taggagattcttttttttttttttttttttttttttttcgagacagggtttctctgtgta 159
Query: 172 ttcctggctgtcctggaactcactctgtagaccaggctggccttgaactcagaaatttgc 231
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 158 gccctgactgtcctggaactcagtctgtagaccaggctgtccttgaactcagaaatttgc 99
Query: 232 ctgc 235
||||
Sbjct: 98 ctgc 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 633
Length adjustment: 9
Effective length of query: 226
Effective length of database: 624
Effective search space: 141024
Effective search space used: 141024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_i11.g1 MSMg01no410_i11.g1 CHROMAT_FILE:
MSMg01no410_i11.g1 PHD_FILE: MSMg01no410_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:18 2005
(244 letters)
>mm_chr14_15639622_15640266
Length = 645
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 tgtgtctaccttccaatgccttccaa-tgctgggtgggtgtttcacaatacaaataaggt 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtctaccttccaatgccttccaaatgctgggtgggtgtttcacaatacaaataaggt 260
Query: 60 gagaaactagcttgtctcagaaagaatggggggcggaatgggtggtgagaaagccaggtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaactagcttgtctcagaaagaatggggggcggaatgggtggtgagaaagccaggtg 320
Query: 120 tagggacacatgcctctaatcacagcttttgggaggccaaagagtttgagactgacctgt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagggacacatgcctctaatcacagcttttgggaggccaaagagtttgagactgacctgg 380
Query: 180 acaacccagaaagactggctcacaaagaagggaagacaaagagaggaaacagggaagaaa 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaacccagagagactggctcacaaagaagggaagacaaagagaggaaacagggaagaaa 440
Query: 240 acc 242
|||
Sbjct: 441 acc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
