Query= MSMg01no412_e07.b1 MSMg01no412_e07.b1 CHROMAT_FILE:
MSMg01no412_e07.b1 PHD_FILE: MSMg01no412_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:34 2005
(539 letters)
>mm_chr14_94196397_94197335
Length = 939
Score = 1035 bits (535), Expect = 0.0
Identities = 538/539 (99%)
Strand = Plus / Plus
Query: 1 atcttgctgataataagaaaatgcatttgaagccaaaacataaaagcataccataaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcttgctgataataagaaaatgcatttgaagccaaaacataaaagcataccataaacta 260
Query: 61 attatctcataaaatggacgttcttagttctaaacacaagaaaatagttcttcatttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attatctcataaaatggacgttcttagttctaaacacaagaaaatagttcttcatttatt 320
Query: 121 ttttttaattttgtatgtgaatacctaaaatcaatggattcaatgttcacaaatgacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttaattttgtatgtgaatacctaaaatcaatggattcaatgttcacaaatgacact 380
Query: 181 gacttaaaaagagttacaataagtttcatactctatggtgtcttcactagtgagaaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacttaaaaagagttacaataagtttcatactctatggtgtcttcactagtgagaaaaat 440
Query: 241 taagtaacttatttaatcaaagctaacaaatggtaatagactaataaacagagtgaatta 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagtaacatatttaatcaaagctaacaaatggtaatagactaataaacagagtgaatta 500
Query: 301 agaccaagtaaatcaaaataagtgatttaaatacttgattatgtccatggttaattaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaccaagtaaatcaaaataagtgatttaaatacttgattatgtccatggttaattaaag 560
Query: 361 tgtgatccacataatacaatgcctaatccaacattgtacttggccttacatagtatgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgatccacataatacaatgcctaatccaacattgtacttggccttacatagtatgtaa 620
Query: 421 taattggagcattgttttccagtgtgttattatttgtaacaaagcagatggaagggtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taattggagcattgttttccagtgtgttattatttgtaacaaagcagatggaagggtaca 680
Query: 481 cttctctcgactaatggtgcaaggcctttcatctcttcttgacttgtttctttctccag 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttctctcgactaatggtgcaaggcctttcatctcttcttgacttgtttctttctccag 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_e07.g1 MSMg01no412_e07.g1 CHROMAT_FILE:
MSMg01no412_e07.g1 PHD_FILE: MSMg01no412_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:34 2005
(431 letters)
>mm_chr14_94406082_94406913
Length = 832
Score = 828 bits (428), Expect = 0.0
Identities = 431/432 (99%), Gaps = 1/432 (0%)
Strand = Plus / Minus
Query: 1 ctcttt-aaataacatttaaaattgacttaaaaaaaaaactatgaattttccttacaggc 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ctctttaaaataacatttaaaattgacttaaaaaaaaaactatgaattttccttacaggc 573
Query: 60 aatcttctctagtgttacaattgttggtaaagcataaaagtcgatatttaaagtccatgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aatcttctctagtgttacaattgttggtaaagcataaaagtcgatatttaaagtccatgt 513
Query: 120 agttatttccaattaataaatatgaaaaatatcaaacaataaataaaagctagtgttata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agttatttccaattaataaatatgaaaaatatcaaacaataaataaaagctagtgttata 453
Query: 180 tatttcttggctatgtagttaaatttctcagtaaaacaaactagaatcgtcttataataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tatttcttggctatgtagttaaatttctcagtaaaacaaactagaatcgtcttataataa 393
Query: 240 ggaaaaatagatatgtgctaaggttgtacaggtccctgtctattacctactagcttcata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggaaaaatagatatgtgctaaggttgtacaggtccctgtctattacctactagcttcata 333
Query: 300 tctggggggtgggtgtaacttattacaataagttagcatgcaatggtgggagcatatgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tctggggggtgggtgtaacttattacaataagttagcatgcaatggtgggagcatatgat 273
Query: 360 agagatatagaattaatcttgtactctaaaagcccatgaagcagggcaaatttgcaattc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agagatatagaattaatcttgtactctaaaagcccatgaagcagggcaaatttgcaattc 213
Query: 420 ttggcttgttat 431
||||||||||||
Sbjct: 212 ttggcttgttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
