Query= MSMg01no412_j06.b1 MSMg01no412_j06.b1 CHROMAT_FILE:
MSMg01no412_j06.b1 PHD_FILE: MSMg01no412_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:59 2005
(505 letters)
>mm_chr14_35431344_35432248
Length = 905
Score = 928 bits (480), Expect = 0.0
Identities = 497/504 (98%), Gaps = 5/504 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctgtgttc--gctgggccccgtggaaatcagctgcctctgcctcccaggttg 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 796 ggaattctctgtg--caggctgggccccgtggaaatcagctgcctctgcctcccagg-tg 740
Query: 62 cagagactgcaagcaggtgccaccaggcttgactaaatagacattttcttcttcaaaact 121
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cagagactgcaagcacgtgccaccaggcttgactaaatagacattttcttcttcaaaact 680
Query: 122 aattgtttagaatcaaacagagcccaaagccaggctagaggggaaagcgctttgtctcct 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aattgtttagaatcgaacagagcccaaagccaggctagaggggaaagcgctttgtctcct 620
Query: 182 gtaaattccaccttccctctccccttgtcatcgtgtttcctgcggtttcaccttgaaata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtaaattccaccttccctctccccttgtcatcgtgtttcctgcggtttcaccttgaaata 560
Query: 242 aggaaacaaaagcttccctgtaccacggcaattgtgtggccatggaatacactaaatgaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aggaaacaaaagcttccctgtaccacggcaattgtgtggccatggaatacactaaatgaa 500
Query: 302 gagtgacctgtgctccctaactggggtgagcaaaggtaacttggaggctggacataggga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gagtgacctgtgctccctaactggggtgagcaaaggtaacttggaggctggacataggga 440
Query: 362 aacagtagtgtccaaccccacccctacccccttccacctcacccacccaccctccgacag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aacagtagtgtccaaccccacccctacccccttccacctcacccacccaccctccgacag 380
Query: 422 ccctcacctaccatgctaagctgcttggagaagccagtctcaaacctcagccttggagga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccctcacctaccatgctaagctgcttggagaagccagtctcaaacctcagccttggagga 320
Query: 482 aaatcgctacaggttcagcataga 505
||||||||||||||||||||||||
Sbjct: 319 aaatcgctacaggttcagcataga 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_j06.g1 MSMg01no412_j06.g1 CHROMAT_FILE:
MSMg01no412_j06.g1 PHD_FILE: MSMg01no412_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:59 2005
(479 letters)
>mm_chr14_35247552_35248430
Length = 879
Score = 673 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Plus
Query: 1 taggtagtatggctattgttacagacaagaacttatagagaatcatacctggacttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggtagtatggctattgttacagacaagaacttatagagaatcatacctggacttctct 260
Query: 61 gggctgacctacctataacaacagggggcagtgtaggctgcaaatactggttgcacaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggctgacctacctataacaacagggggcagtgtaggctgcaaatactggttgcacaaat 320
Query: 121 tggtccgacaacattctattgtcctgcgtagctgggctttcggtgaatcctttaagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtccgacaacattctattgtcctgcgtagctgggctttcggtgaatcctttaagaaaa 380
Query: 181 ataatggaaaaattaaaaggcttgacatattaaattgaatatgaatatctttagtattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataatggaaaaattaaaaggcttgacatattaaattgaatatgaatatctttagtattgg 440
Query: 241 taaatataatttataacccagagacaaggatttccaaacatgtcaaaaaatattagctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaatataatttataacccagagacaaggatttccaaacatgtcaaaaaatattagctgg 500
Query: 301 gtatggtggcatacacctttaatcccagcactcaaaaaggcagaggca 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatggtggcatacacctttaatcccagcactcaaaaaggcagaggca 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
