XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TCTCTCTGAACCCCATTTTTAATGGGGTTATTTGAATTTCTGGAGTCCAG
CTTCTTGAGCTTTTTGTATATACTGGATATCAGTCCCCTATCAAAATTAG
GATGGGTAAATATCATTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTG
ACAGTGTCTTTTGCCTTACAAAAGCTTTGCACTTTTATGGGTCCCATTTG
TCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTGTTTCGGGATTT
TTCCCCTGTAACCATGTCTTCGAGGCTTTCCCCACTTTCTCCTCTATTAA
TTTCAGTGTCTCTGGTCTTTGATCCACTTAAACATGAGCTTTTTACAAGG
AGATAAGAATGGATCAATTTGCATTCTTCTACATGATAACCGGCAGTTAT
GCCAGCACCATTTGCTGAAAATTCTGTCTTTTTTCCACTGGATGGTTTTA
GCTCCCTTGTTTAAGATCAAGTGACCATGGCTGTGTGAATTCATTTCTGG
GTCTTCAATTCTATTCCCTTGATCTACCTGTCTGTCACTGAACCAGTAGC
ATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTAATGTCAGGCATG
GTGATTCCACCAGAGGTTCTTTTATTGGTAAGAATAGTTTTTGCTCTCCT
AGATTTTTTTATTTTN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTTCACAGAGAAACCCTGCC
TTAGAAAAACAAAACAAACAAAACAAAACAAAACAAAACAAAACAAAACA
AAACAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAACA
AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA
AAACAAAAGCAATACCAAGAACTCAGGTCCACACACTCTCTGGAGGAACA
CTGGCTATTCGTTGCTTCCTAAATATGTATGCATGTAATGCGCAGTCACT
AAACGAACATGAAGATGGTGCAGGTTTAATTATCTACCCTCTTCACTCCT
GGACATCTGTAACACACATCAGTGTAAAATCAGACTCTGGGACACTTATA
TTAAGTTGCTATGTTCAGGATTTCTCTGCCATAAGTGACAAAGAACAAAC
AGGCTAATAGTAAAAGACAGGCTCTACCACCATGTCCAGGAGTCAGAGAA
AGGGCTGAAAGAGAGAGCAGGATCTATGGGCTATGATGTGGGCATGGGTA
ACATTTCATACAATGACATGAGCAGTGCCTTTGCCTCTGTGTGTAAGAAC
ATGGCATATTCTGGACACAGAGACGGACTCTGGTGACTTGGGCATGTANG
TTGGTAAGACATTGGTGCATACAGCAGAA

Query= MSMg01no416_f13.g1 MSMg01no416_f13.g1 CHROMAT_FILE:
MSMg01no416_f13.g1 PHD_FILE: MSMg01no416_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:57 2005
         (546 letters)



>mm_chr14_18499046_18499991
          Length = 946

 Score =  826 bits (427), Expect = 0.0
 Identities = 500/547 (91%), Gaps = 36/547 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggacagccagggcttcacagagaaaccctgccttagaaaaacaaaac-aaacaaaaca 59
           ||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||
Sbjct: 904 caggacagccagggcttcacagagaaatcctgccttggaaaaacaaaacaaaacaaaaca 845

                                                                       
Query: 60  aaacaaaacaaaacaaaacaaaacaaaacaaagcaaagcaaagcaaagcaaagcaaagca 119
           |||||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||
Sbjct: 844 aaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacacagcaaagcaaagca 785

                                                                       
Query: 120 aagcaaagcaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaaca 179
           ||||||||                                   |||| ||||||||||||
Sbjct: 784 aagcaaag-----------------------------------caaagcaaaacaaaaca 760

                                                                       
Query: 180 aaacaaaacaaaagcaataccaagaactcaggtccacacactctctggaggaacactggc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aaacaaaacaaaagcaataccaagaactcaggtccacacactctctggaggaacactggc 700

                                                                       
Query: 240 tattcgttgcttcctaaatatgtatgcatgtaatgcgcagtcactaaacgaacatgaaga 299
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 699 tattcgttgcttcctaaatatgtatgcatgtaatgcgcagtcactcaacgaacatgaaga 640

                                                                       
Query: 300 tggtgcaggtttaattatctaccctcttcactcctggacatctgtaacacacatcagtgt 359
           | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 639 tagtgcaggtttaattatctaccctcttcactcctggacatctgtaacacacaccagtgt 580

                                                                       
Query: 360 aaaatcagactctgggacacttatattaagttgctatgttcaggatttctctgccataag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaaatcagactctgggacacttatattaagttgctatgttcaggatttctctgccataag 520

                                                                       
Query: 420 tgacaaagaacaaacaggctaatagtaaaagacaggctctaccaccatgtccaggagtca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgacaaagaacaaacaggctaatagtaaaagacaggctctaccaccatgtccaggagtca 460

                                                                       
Query: 480 gagaaagggctgaaagagagagcaggatctatgggctatgatgtgggcatgggtaacatt 539
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gagaaagggctgaaagggagagcaggatctatgggctatgatgtgggcatgggtaacatt 400

                  
Query: 540 tcataca 546
           |||||||
Sbjct: 399 tcataca 393


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 28
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)