Query= MSMg01no416_h01.b1 MSMg01no416_h01.b1 CHROMAT_FILE:
MSMg01no416_h01.b1 PHD_FILE: MSMg01no416_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:03 2005
(656 letters)
>mm_chr14_112300926_112301979
Length = 1054
Score = 1162 bits (601), Expect = 0.0
Identities = 635/647 (98%), Gaps = 5/647 (0%)
Strand = Plus / Plus
Query: 11 ggaattcctgagtttatcactgaaatgttctgtgtcactctttcttctactttttcttgg 70
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggaattcctgagtttatgactgaaatgttctgtgtcactctttcttctactttttcttgg 271
Query: 71 gcatttttccttctgtgctgttttctgtcctggtgtgtttggttttgtctcaccttgttt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcatttttccttctgtgctgttttctgtcctggtgtgtttggttttgtctcaccttgttt 331
Query: 131 tattctactactactcctaagaagcccgcttttcttcgtttttattcatttatattttca 190
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 332 tattctactactactcctaagaagcccgcttttcctcgtttttattcatttatattttca 391
Query: 191 taataagaaacgt-aggtggataagatccagaagtggagaccaactggaagaagtcgtgg 249
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 taataagaaacgtgag-tggataagatccagaagtggagaccaactggaagaagtcgtgg 450
Query: 250 gagaagaaaacgtaatcaggatatgttatatgatgaagtaacatctgcttttaataagag 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gagaagaaaacgtaatcaggatatgttatatgatgaagtaacatctgcttttaataagag 510
Query: 310 aaaaaaaatcaaatttttacaacttttaggtttaaaatttaaagaagccttcctaaaagt 369
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaaaaaa-tcaaaattttacaacttttaggtttaaaatttaaagaagccttcctaaaagt 569
Query: 370 gtcactatagtgctgtttatttcttttcttatcctgagatatattttcagaaatactaat 429
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtgactatagtgctgtttatttcttttcttatcctgagatatattttcagaaatactaat 629
Query: 430 tcaaacaaatataaataaaagaggcttactgtcataaaataagagtcagtcacatcaaga 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tcaaacaaatataaataaaagaggcttactgtcataaaataagagtcagtcacatcaaga 689
Query: 490 tgtgatatcattttaacttgttctaatatcttgtagtcatcaatatactaaagaatgtat 549
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tgtgatatcattttaactttttctaatatcttgtagtcatcaatatactaaagaatgtat 749
Query: 550 tcttcatgcaaatgaaaaattttggaaaagaaaaatctgtttcctcctatggagaaagct 609
||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 750 tctacatgcaaatgaaaaattttggaaaa--aaaatctgtttcctcctatggagaaagct 807
Query: 610 tttggtttatatttgcatgtattaatactaatgcttcctcttgttgt 656
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 tttgttttatatttgcatgtattaatactaatgcttcctcttgttgt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1054
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1044
Effective search space: 674424
Effective search space used: 674424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_h01.g1 MSMg01no416_h01.g1 CHROMAT_FILE:
MSMg01no416_h01.g1 PHD_FILE: MSMg01no416_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:04 2005
(511 letters)
>mm_chr14_112451660_112452573
Length = 914
Score = 859 bits (444), Expect = 0.0
Identities = 495/518 (95%), Gaps = 11/518 (2%)
Strand = Plus / Minus
Query: 1 agttgagcttaagtgttatgaataaaatcaaacaaatacaataaaataaaatgtactaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 agttgagcttaagtgttatgaataaaatcaaacaaatacaataaaataaaatgtactaag 655
Query: 61 ttaattgtgaaaaaaaaaa-------gggaccagcaatgagcaatgaagactatcctagg 113
||||||||| |||||| |||||||||||||| |||||||||||||||||||
Sbjct: 654 ttaattgtg----aaaaaagggggtggggaccagcaatgaccaatgaagactatcctagg 599
Query: 114 tttctctgagttactgatgcagaatacaattgcatggaagagacgggtataagaaaggat 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tttctctgagttactgatgcagaatacaattgcatggaagagacgggtataagaaaggat 539
Query: 174 cttagggggaaaagatagtgagaagacacaaaagcaagaatcagcttgaggcacactctc 233
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 538 cttagggggaaaagatagtgagaagacacaagagcaagaatcagcttgaggcacactctc 479
Query: 234 taagcagggagaaggctggtggtctagagtttcatgagctaagggtgactgtgagattgt 293
|||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 478 taagcatggagaaggctgggggtttagagtttcatgagctaaggatgactgtgagattgt 419
Query: 294 cagggatgaggcaaatctgcttcagaggtttgagggaaagttgggcttttatttaaaata 353
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 cagggatgaggcaaatctgcttcagaggtttgagggaaagttgggctttcatttaaaata 359
Query: 354 aattcactaaaggtgtttgaatatcacaaatgtattttttaatggtaattattactggct 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aattcactaaaggtgtttgaatatcacaaatgtattttttaatggtaattattactggct 299
Query: 414 atggtctgcaaaatggataagaatcatttaactatcacttttaagaagctgtggaataaa 473
|||||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 298 atggtctgcaaaatgggtaagaatcatttaactatgacttttaagaggctgtggagtaaa 239
Query: 474 tagtatctctcaaagaatcagatgccatattaaataga 511
|||||||||||||||| |||||||||||||||||||||
Sbjct: 238 tagtatctctcaaagagtcagatgccatattaaataga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 914
Length adjustment: 10
Effective length of query: 501
Effective length of database: 904
Effective search space: 452904
Effective search space used: 452904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
