XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAGCA
ATTACCAAATACTGAGGACTAGATCTTACTTCTCAAGTAACAAACATCTT
AAAATCCTTGTTTACATTAAATTTCCCATATATTTATCTTTGTATACAGC
CAAGTATAAACGCTTCTCTTTCAACTCAGAAAACAAGGGCACTTTCATTA
CAGAACCTTTTATCTTTTTAAGTAGTTTGATGTAGAAGGCTCTTTCAGAC
ATAAAGTTTAAGAACTAATAGTCACAAAGCATAGCAGTTCAAATGAAGTC
ACTAGTATTTTTACTTCAGTTGAAAAACATAGCTACAACTTCAAAAATTA
GTCCACAGTTGTTCTTTATATAACAGTGTACAGATAGTGTTATATAAAGA
AGCAGAACATTTAATAAAAAGAAAACTCTTTCCAAAGTGCTTCAGTGGCC
TTTGGACATTGTTTGTTTTGTTGCATTCTGAATTTTAGCAGTTGAATACT
GATGGTAATTTTAGGTGAGATCAACCAAGAATATCCCCAGTAGAGAAATC
TCATCTTATTTATGGCCCACCCATCACTCATCCCCTTTAATAATTAACAT
CAATGCTTGCATCCCATTTTCTGGAAGCCTTTTTAATAAAAGTTATCTTG
TAAACTTGTAGGCCTTACAATTGGGGGGGATTAAGGACTCCTTTAAAAAG
AGGGAGGCCATGGTA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTCCTAGTCACTCCCATTCTCAGG
GTGTAATAGTGGGGTGATGGGCAAGCAACGAATCGGGAGCTGTCACGCCA
TATCAGGTGCTGAAACGTCACGCTGCGGGTTATAAAAGCAGCGCATTTTC
CCGGTTCGGAATCTTCCTGAGAAACAAGCAATAAAGCTCTTGCCGCGGAA
GATTCTGGTTTGTTGCGTCTTTCTTGCCAGTCGAGCGGGACGCAATACCA
TATCTTGCTTTTCTGCTGTGATGGTATATCCAGGATTTTCTATGGTGGGG
GAGTTTAGTTCTGATGATGCCAAGTAACCTTGGTTTCTGTGGCTTCTCTT
TCTACACTTGCTTTCTGCCATCTGATTATCTCAAGTGCTCCTTGCTTTCG
ATATATCTGATTGGAGCTTGTCCTTCCTTATTCCCAGTTGAGTCAGAACT
TCTCAGAGTCCAACTTTCTTTGTGATCCTGTGATTCTGGGATCCTGTGAT
GCTAAGATTCTGGATATGCCAGAGTTCTTGGCACTCAAATTCCTCTGAGA
TCCTGGTGTGACCCACCCCCTGGGATCCTAAGATCCTGAATGCATTAAAG
CACCTGTAAGTGATACTTCCTCTGGGAAATGTGCGTTCTGTCAGCTGAGA
TCTTAAATCCAGGTTTGACCACGGTTG

Query= MSMg01no416_o11.b1 MSMg01no416_o11.b1 CHROMAT_FILE:
MSMg01no416_o11.b1 PHD_FILE: MSMg01no416_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:38 2005
         (453 letters)



>mm_chr14_90522390_90523243
          Length = 854

 Score =  832 bits (430), Expect = 0.0
 Identities = 445/450 (98%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctagcaatt-accaaatactgaggactagatcttacttctcaagtaacaaacatc 63
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagcaactcaccaaatactgaggactagatcttacttctcaagtaacaaacatc 264

                                                                       
Query: 64  ttaaaatccttgtttacattaaatttcccatatatttatctttgtatacagccaagtata 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaaatccttgtttacattaaatttcccatatatttatctttgtatacagccaagtata 324

                                                                       
Query: 124 aacgcttctctttcaactcagaaaacaagggcactttcattacagaaccttttatctttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacgcttctctttcaactcagaaaacaagggcactttcattacagaaccttttatctttt 384

                                                                       
Query: 184 taagtagtttgatgtagaaggctctttcagacataaagtttaagaactaatagtcacaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagtagtttgatgtagaaggctctttcagacataaagtttaagaactaatagtcacaaa 444

                                                                       
Query: 244 gcatagcagttcaaatgaagtcactagtatttttacttcagttgaaaaacatagctacaa 303
           ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 445 gcatagcagttcaaatgaagtcactagaagttttacttcagttgaaaaacatagctacaa 504

                                                                       
Query: 304 cttcaaaaattagtccacagttgttctttatataacagtgtacagatagtgttatataaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttcaaaaattagtccacagttgttctttatataacagtgtacagatagtgttatataaa 564

                                                                       
Query: 364 gaagcagaacatttaataaaaagaaaactctttccaaagtgcttcagtggcctttggaca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaagcagaacatttaataaaaagaaaactctttccaaagtgcttcagtggcctttggaca 624

                                         
Query: 424 ttgtttgttttgttgcattctgaattttag 453
           ||||||||||||||| ||||||||||||||
Sbjct: 625 ttgtttgttttgttgtattctgaattttag 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space:   373892
Effective search space used:   373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)