Query= MSMg01no418_j08.b1 MSMg01no418_j08.b1 CHROMAT_FILE:
MSMg01no418_j08.b1 PHD_FILE: MSMg01no418_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:49 2005
(578 letters)
>mm_chr14_61891362_61892334
Length = 973
Score = 1038 bits (537), Expect = 0.0
Identities = 564/575 (98%), Gaps = 5/575 (0%)
Strand = Plus / Minus
Query: 4 ggaattcgttaatttaccaggcatcatttagatctcaaccatgccaggctgtcccacagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ggaattcgttaatttaccaggcatcatttagatctcaaccatgccaggctgtcccacagg 714
Query: 64 ggttgaagtcctgtactgtggggtaagtgtggcagatacagttccactgaaacaaaaaag 123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 713 ggttgaagtcctgtactgtggggtaagtatggcagatacagttccactgaaacaaaaaag 654
Query: 124 gtaaacataattttgttgctttttctggaattgtgttgtagaatgtgaactgactagaca 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gtaaac---attttgttgctttttctggaattgtgttgtagaatgtgaactgactagaca 597
Query: 184 tggtaacgttggcatagcgatgttaacagcctgcgatctgagatgggtgcaaacgctgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tggtaacgttggcatagcgatgttaacagcctgcgatctgagatgggtgcaaacgctgta 537
Query: 244 tcctaaaatgtccattttcttagctcctcctgtagctgaatttatgaagtgtgtacccaa 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 536 tcctaaaatgtccattttcttagctcctcctgtagctgaatttatggagtgtgtacccaa 477
Query: 304 caggacatgtcttagtggtggtatgttttctcttccagtatccctggtttgaggtacttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 caggacatgtcttagtggtggtatgttttctcttccagtatccctggtttgaggtacttt 417
Query: 364 caagcgtcactttcctggatgtgacacttaattaggaaatgaagtcactgcattccaact 423
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caagtgtcactttcctggatgtgacacttaattaggaaatgaagtcactgcattccaact 357
Query: 424 tgtgctttgtaatgttattctgttgtgcatgagggaaatgtcccactgaagtaggagaca 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgtgctttgtaatgttattctgttgtgcatgagggaaatgtcccactgaagtaggagac- 298
Query: 484 gagggaaagcaggcaaatcaactcagtgcttctcaactgcttacggccttaggtcccctt 543
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 297 -agggaaagcaggcaaatcaactcagtgcttctcaactgcttacagccataggtcccctt 239
Query: 544 tcagatctgtggcgctcatagatttgctataagct 578
||| |||||||||||||||||||||||||||||||
Sbjct: 238 tcaaatctgtggcgctcatagatttgctataagct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 973
Length adjustment: 10
Effective length of query: 568
Effective length of database: 963
Effective search space: 546984
Effective search space used: 546984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_j08.g1 MSMg01no418_j08.g1 CHROMAT_FILE:
MSMg01no418_j08.g1 PHD_FILE: MSMg01no418_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:49 2005
(564 letters)
>mm_chr14_61700878_61701841
Length = 964
Score = 1015 bits (525), Expect = 0.0
Identities = 554/564 (98%), Gaps = 2/564 (0%)
Strand = Plus / Plus
Query: 2 ttttttccccctgtttagttgtaggagtttattttaaataacctatagatgattaaaggg 61
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 202 ttttttccccctgtttagttgtaggagtttattttaaataacctacagatgattaaaggg 261
Query: 62 aaattcatgataaaaacagcagacacttgaggaaagatgtgggagtggactctgcacaca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaattcatgataaaaacagcagacacttgaggaaagatgtgggagtggactctgcacaca 321
Query: 122 cactaaactaacaatgcctctaaaactaacgattattgcaagataaaaagtcttcacatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cactaaactaacaatgcctctaaaactaacgattattgcaagataaaaagtcttcacatt 381
Query: 182 aaaatttttcc-tttttttgtctttgcctcattttttttttacacaattacaaaagaaaa 240
|||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 382 aaaaattttccgtttttttgtctttgcctcattttttttt-acacaattacaaaagaaaa 440
Query: 241 agtttattccctaaaatcttgattattttccctttttgttttgtctttgtttttcttggc 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtaaaagccctaaaatcttgattattttccctttttgttttgtctttgtttttcttggc 500
Query: 301 ccaaatgctcattttcctctaaatttattgacctgtggaaggttttatacaataaaatct 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaaacgctcattttcctctaaatttattgacctgtggaaggttttatacaataaaatct 560
Query: 361 ttcaaatgaaagacccgggtttccaaagaaaaagatggatcccttaaaaggtacaaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcaaatgaaagacccgggtttccaaagaaaaagatggatcccttaaaaggtacaaagaa 620
Query: 421 tggtcagcgcaaagcatgatgggaaaatggtttcagtcgctgattatttcactatcttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtcagcgcaaagcatgatgggaaaatggtttcagtcgctgattatttcactatcttta 680
Query: 481 gactcattcgccctttatccctcctcagcctcaagctacaggatctttaagatcaagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gactcattcgccctttatccctcctcagcctcaagctacaggatctttaagatcaagaag 740
Query: 541 aagacttanatattttaaaataat 564
|||||||| |||||||||||||||
Sbjct: 741 aagacttaaatattttaaaataat 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|