Query= MSMg01no418_j23.b1 MSMg01no418_j23.b1 CHROMAT_FILE:
MSMg01no418_j23.b1 PHD_FILE: MSMg01no418_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:52 2005
(535 letters)
>mm_chr14_36503815_36504747
Length = 933
Score = 949 bits (491), Expect = 0.0
Identities = 516/525 (98%), Gaps = 2/525 (0%)
Strand = Plus / Plus
Query: 11 tccctgctctagcccacttccttcctcgaagggtctttccttaccaactatctccacttc 70
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 211 tccctgctccagcccacttccttcctcaaagggtctttccttaccaactatctccacttc 270
Query: 71 tgcaacccacacattatgacccaatgtttgttttagaataaaaaaaaaatccttgttctg 130
||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 tgcaacccatacattatgacccaatgtttgttttagaataaaaaaaa--tccttgttctg 328
Query: 131 taactgcccactaaattctgatattcaccagtgtcaatgtggaacatacttattcccatt 190
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 329 taactgcccactaaattctgatattcaccagtgtcagtgtggaacatacttattcccatt 388
Query: 191 gctttgttataatattataaaataaatatcatttttatttggcaaatatttctcttgcta 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctttgttataatattataaaataaatatcatttttatttggcaaatatttctcttgcta 448
Query: 251 tttaggttgacattggtaaataaaccaaggttccaagaggagagttttttttcaagttta 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 449 tttaggttgacattggtaaataaaccaaggttccaagaggagagttttttttcaagttca 508
Query: 311 tgaaacttgactcccaaactcatgacacttctgctgtacaaactgcctcttctgacatca 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgaaacttgactcccaaactcatgacacttctgctgtacaaactgcctcttctgacatca 568
Query: 371 caaagatggatgagactaaagatagggcacagaaccaaagcagaagcagcagcaggtgta 430
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 569 caaagatggatgagactaaagatagggcacagaaccaaaacagaagcagcagcaggtgta 628
Query: 431 tctacatgaagataatctggggctgaggccagtagccataaaattattattttgactatt 490
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctacatgaagataatatggggctgaggccagtagccataaaattattattttgactatt 688
Query: 491 aggtcactaaatgcttgcttcctccccatgtacaaggcaagaaaa 535
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aggtcactaaatgcttgcttcctccccatgtacaaggcaagaaaa 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 933
Length adjustment: 10
Effective length of query: 525
Effective length of database: 923
Effective search space: 484575
Effective search space used: 484575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_j23.g1 MSMg01no418_j23.g1 CHROMAT_FILE:
MSMg01no418_j23.g1 PHD_FILE: MSMg01no418_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:52 2005
(123 letters)
>mm_chr14_36679331_36679853
Length = 523
Score = 226 bits (117), Expect = 3e-64
Identities = 120/121 (99%)
Strand = Plus / Minus
Query: 1 aggtcttcatgatcccccacaccttacactctgtgtttcatacaagaggagctcaagaaa 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtcttcatgatcccccacacctcacactctgtgtttcatacaagaggagctcaagaaa 262
Query: 61 atctgttgagtaatttaaaatgaagagaataggggaggaagaaagggaggggtgatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgttgagtaatttaaaatgaagagaataggggaggaagaaagggaggggtgatggag 202
Query: 121 g 121
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 123
Length of database: 523
Length adjustment: 8
Effective length of query: 115
Effective length of database: 515
Effective search space: 59225
Effective search space used: 59225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
