Query= MSMg01no421_a06.b1 MSMg01no421_a06.b1 CHROMAT_FILE:
MSMg01no421_a06.b1 PHD_FILE: MSMg01no421_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:01 2005
(249 letters)
>mm_chr14_26049508_26050156
Length = 649
Score = 456 bits (236), Expect = e-133
Identities = 247/252 (98%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 1 aactcaggggaaacaatctgacccatgtattcttcagtctgttcaaccagaaaatatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aactcaggggaaacaatctgacccatgtattcttcagtctgttcaaccagaaaatatggt 315
Query: 61 aattatatttcaatctccagaaattacggagggaaatcagcaatgaattaagtcacctag 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 314 aattatatttcaatctccagaaattacggagggaaattagcaatgaattaagtcacctag 255
Query: 121 gcaaggcttctgggtggttgagtgtctcctggctggggcagaataagtgaactcttattt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 254 gcaaggcttctgggtggttgagtgtctcctggctggggcagaataagcgaactcttattt 195
Query: 181 tattttttaattattatt---ttttttaccatggtgcatctcttctggtctacacatctt 237
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tattttttaattattattattttttttaccatggtgcatctcttctggtctacacatctt 135
Query: 238 cacatctgaatt 249
||||||||||||
Sbjct: 134 cacatctgaatt 123
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_a06.g1 MSMg01no421_a06.g1 CHROMAT_FILE:
MSMg01no421_a06.g1 PHD_FILE: MSMg01no421_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:01 2005
(591 letters)
>mm_chr14_25863129_25864119
Length = 991
Score = 1077 bits (557), Expect = 0.0
Identities = 579/591 (97%), Gaps = 8/591 (1%)
Strand = Plus / Plus
Query: 1 ttccatatgaagttttaattcatactcactccgattcaggagatagtttctccatcttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccatatgaagttttaattcatactcactccgattcaggagatagtttctccatcttac 260
Query: 61 agacaaaaagtctgatcctcacaagagttacagaagtgattgaagactgccaacctataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacaaaaagtctgatcctcacaagagttacagaagtgattgaagactgccaacctataa 320
Query: 121 ataagtttaaaaagcaaagtatccaacagttggtcccttctagagcctcatacagtatga 180
||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ataagttaaaaaagcaaa--------cagttggtcccttctagagcctcatacagtatga 372
Query: 181 tgaagttgcctcttctgaaaggtcatctagaggtcatttggcacactctcctttgcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgaagttgcctcttctgaaaggtcatctagaggtcatttggcacactctcctttgcagaa 432
Query: 241 atgacaagtgtaaaacccagagaccccagataactggcctaggtcacacagtaaatgaga 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 433 atgacaagtgtaaaacccagagaccccagataactggccaaggtcacacagtaaatgaga 492
Query: 301 agcaggggaaaatgggtccttgcatctcttagagccctggttcctgaagggagatggacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agcaggggaaaatgggtccttgcatctcttagagccctggttcctgaagggagatggacg 552
Query: 361 agagaaacagcagattcgtaaggcggcatctcacacgaaatggtgtgtgacatgcagctg 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agagaaacagcagatttgtaaggcggcatctcacacgaaatggtgtgtgacatgcagctg 612
Query: 421 tgtggggtgggaagcagcatgagtcatgaagcagtcagtgtgggacatgatgccctgagt 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 613 tgtggggtgggaagcagcatgagtcatgaagcagtcagtgtgggacatgacgccctgagt 672
Query: 481 tgcgtgaagcaccgtatggcacaaagtgatgaggggcgttcagcactgtgtggcaagacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgcgtgaagcaccgtatggcacaaagtgatgaggggcgttcagcactgtgtggcaagacg 732
Query: 541 ccgtgtggaccatgaagccacgtggagcatgacgccgagtgaaacttaaag 591
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ccgtgtggaccatgaagccacgtggagcatgacgccgagtgaaacttaaag 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
