Query= MSMg01no421_c13.b1 MSMg01no421_c13.b1 CHROMAT_FILE:
MSMg01no421_c13.b1 PHD_FILE: MSMg01no421_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:13 2005
(248 letters)
>mm_chr14_18663795_18664442
Length = 648
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 aaaaaaaaatcacaatgtttttccactaaatgatcttaccagaattccacccctacaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaaaaatcacaatgtttttccactaaatgatcttaccagaattccacccctacaact 260
Query: 61 gccttccactgacacctagctgcaaagcaaccagcaagcaaagctgggcacctccccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccttccactgacacctagctgcaaagcaaccagcaagcaaagctgggcacctccccatt 320
Query: 121 cttgaagcagtgtagaagctggtcctgaaggagcatcagacccacaatcctggtcctaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgaagcagtgtagaagctggtcctgaaggagcatcagacccacaatcctggtcctaat 380
Query: 181 tatacagctgatggagattcttctatgggagcaggtgcagttcagacctttgtttgaaga 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagacagctgatggagattcttctatgggagcaggtgcagttcagacctttgtttgaaga 440
Query: 241 atgc 244
||||
Sbjct: 441 atgc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_c13.g1 MSMg01no421_c13.g1 CHROMAT_FILE:
MSMg01no421_c13.g1 PHD_FILE: MSMg01no421_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:14 2005
(513 letters)
>mm_chr14_18811005_18811914
Length = 910
Score = 847 bits (438), Expect = 0.0
Identities = 474/490 (96%), Gaps = 9/490 (1%)
Strand = Plus / Minus
Query: 1 ctctttgtgacctttgactaggaaaagactcatctccttatctgtcttttcaaaccagtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 487 ctctttgtgacctttgactaggaaaagactcatctccttatctgtcttttcaaaccag-t 429
Query: 61 tttttttctttgtggttattatttttagttagtaagtgaagtgaccagttttattgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tttttttctttgtggttattatttttagttagtaagtgaagtgaccagttttattgttgt 369
Query: 121 atgctctttacatctgttatgctgttcgtattcataccccatgtccttccccatctccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgctctttacatctgttatgctgttcgtattcataccccatgtccttccccatctccgc 309
Query: 181 tcccctatcttgcctggtttctttgcttctgttttcacgccacatgtgtgttcctccctc 240
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 308 tccccaatcttgcctggtttctttgcttctgttttcacgccaca--tgtgttcctccctc 251
Query: 241 accctcatttgattcttttttgtgcctgctttcttcttcca------ccccaccccacac 294
|||||||||||| | | ||||||||||||||||||||||| |||| ||||||||
Sbjct: 250 accctcatttgaaacctctttgtgcctgctttcttcttccacccccccccccccccacac 191
Query: 295 attgttcttaattatgtgtaggtatctgtacatatgtgagtgctggtgcctgactgtgtc 354
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 190 attgttcttaattatgtgtaggtatctgtacatatgtgagttctggtgcctgactgtgtc 131
Query: 355 agtcagagcagtcagatttccttggagctggggtttcatgtgggaattgtgaggttccca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agtcagagcagtcagatttccttggagctggggtttcatgtgggaattgtgaggttccca 71
Query: 415 aagagagtgctggaaattagaatgaggtcctctgcaagaacagtaagcactcctgaccac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aagagagtgctggaaattagaatgaggtcctctgcaagaacagtaagcactcctgaccac 11
Query: 475 tgagctgcct 484
||||||||||
Sbjct: 10 tgagctgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 910
Length adjustment: 10
Effective length of query: 503
Effective length of database: 900
Effective search space: 452700
Effective search space used: 452700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
