NGGGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAAGACTATCTCCACCTTAATGAGTTTTAATCTAGCCTA
GGCTATGAACCATGTCTCAAAAAACAATCTTGATAAATAACTTTATTTTT
TAAAGTAAGTTATTGTTAGTCTAGAAAAACATAAGAAGTAATCTTTGAAA
TATTCTCATAAGTTATTGATAATATACCAATATCGGCTTGCTTTGTCATA
GGATCAAATATAAATAATTAACATTATCTTCATTTTTTTCTATTTTTGTG
AATTTTTTAGTGATTTATTTTAAAAATTTTTCTCACAAAAATTAATTGGA
GAATAACATCCACCTTGATAATAATAACAACCATCAGTGATTTACAAAGT
TAAAGATTATTAATGAATGAAAGCACTGTAAAATGTGACTATAGTATATT
GTCCTTCATACAAAGTAGTATAAATGATGGAAACACCCACACTACTTTTG
GCATTAGCCCACAAGTTCAGAGAAAACACTGACACACACACACACACACA
CACACACACTCACACATCCACACACACACTCATTCTCACACACACACACA
TATGCACACCACTTTGACCTAATTTCAGATTCAGTTTTCCTTTTTCTTTT
ACAGAGCCTGTTGCTGATTCCAAAACCTAACTCATGGCACAACTCCCCAG
AATGTATTTTCTATTGATATATTTTGAATCTGATAACA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTTGAAGTAGCCTAATCTTATAATAATA
TGCATTTATATTGTTATATCTCATGTTTTATCTCAAAAGTTGTTCAATCG
GTGCTTATATAATAAAGGAAATAAATATTAACTCGTTCACAACTTCAGTG
GCTTAAGATTTGAGCACTTTGTATGAGTATTATGTCCTTTTGAGACAATG
GACATTTTTAGAGAGACAAACAAACCTCCTTATATTGGGAACTGAAAACT
TTCCTTTTCCAGGCCAAAACTTATTTTCAGAACACAGCCATGATAATGTC
TAATTACTAAACCACCAGGAGACTGAGAATTCCAATTTTAGTGTGAAAAT
GAAATAAAAGATGATGTTGAATAAGAATGTCCTCATTAGTCTTCAAAACA
TTCTCACGTTGAAAGGTTGTCAAAAGTCTTAGAACACTGGACTGACTTCC
AGGAAATAGCCTGATAAGCCAGAAATATTCTTGTCTTTCTTAAATAAAAA
CTTCAGTGGAAAGCAATTTTTATAATGCTCTTTATCTGTAAGTTTTATGA
TGTTCTATAACAAAATAAAAAGGCATACACATAATTTTTGTTTTTGCTAC
TTCAAACACATGATGTAGTGAAATCTTTATAACTACTTTTTTGGAAATGG
GCAATGATTTTCTTGTTAGAAATGCTCTCACATGTTAGAATCCTCCAAAT
CACACCCCAAAATAAATG

Query= MSMg01no421_e11.b1 MSMg01no421_e11.b1 CHROMAT_FILE:
MSMg01no421_e11.b1 PHD_FILE: MSMg01no421_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:24 2005
         (273 letters)



>mm_chr14_124285228_124285900
          Length = 673

 Score =  491 bits (254), Expect = e-143
 Identities = 266/270 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaagactatctccaccttaatgagttttaatctagcctaggctatgaaccatgt 63
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggaattcaagactagcttcaccttaatgagttttaatctagcctaggctatgaaccatgt 486

                                                                       
Query: 64  ctcaaaaaacaatcttgataaataactttattttttaaagtaagttattgttagtctaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctcaaaaaacaatcttgataaataactttattttttaaagtaagttattgttagtctaga 426

                                                                       
Query: 124 aaaacataagaagtaatctttgaaatattctcataagttattgataatataccaatatcg 183
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 425 aaaacataagaagtaatctttgaaatattctcataagttattgctaatataccaatatcg 366

                                                                       
Query: 184 gcttgctttgtcataggatcaaatataaataattaacattatcttcatttttttctattt 243
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 365 gcttgctttgtcataggatcaaatagaaataattaacattatcttcatttttttctattt 306

                                         
Query: 244 ttgtgaattttttagtgatttattttaaaa 273
           ||||||||||||||||||||||||||||||
Sbjct: 305 ttgtgaattttttagtgatttattttaaaa 276


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space:   175296
Effective search space used:   175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no421_e11.g1 MSMg01no421_e11.g1 CHROMAT_FILE:
MSMg01no421_e11.g1 PHD_FILE: MSMg01no421_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:24 2005
         (546 letters)



>mm_chr14_124043530_124044475
          Length = 946

 Score = 1002 bits (518), Expect = 0.0
 Identities = 539/546 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgaagtagcctaatcttataataatatgcatttatattgttatatctcatgttttatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgaagtagcctaatcttataataatatgcatttatattgttatatctcatgttttatc 260

                                                                       
Query: 61  tcaaaagttgttcaatcggtgcttatataataaaggaaataaatattaactcgttcacaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tcaaaagttgttcaatcggtgcttatataataaaggaaataaatattaactcattcacaa 320

                                                                       
Query: 121 cttcagtggcttaagatttgagcactttgtatgagtattatgtccttttgagacaatgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcagtggcttaagatttgagcactttgtatgagtattatgtccttttgagacaatgga 380

                                                                       
Query: 181 catttttagagagacaaacaaacctccttatattgggaactgaaaactttccttttccag 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 catttttagagagacaaacaaacctctttatattgggaactgaaaactttccttttccag 440

                                                                       
Query: 241 gccaaaacttattttcagaacacagccatgataatgtctaattactaaaccaccaggaga 300
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccaaaactcagtttcagaacacagccatgataatgtctaattactaaaccaccaggaga 500

                                                                       
Query: 301 ctgagaattccaattttagtgtgaaaatgaaataaaagatgatgttgaataagaatgtcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgagaattccaattttagtgtgaaaatgaaataaaagatgatgttgaataagaatgtcc 560

                                                                       
Query: 361 tcattagtcttcaaaacattctcacgttgaaaggttgtcaaaagtcttagaacactggac 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tcattagtcttcaaaacattctcacattgaaaggttgtcaaaagtcttagaacactggac 620

                                                                       
Query: 421 tgacttccaggaaatagcctgataagccagaaatattcttgtctttcttaaataaaaact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgacttccaggaaatagcctgataagccagaaatattcttgtctttcttaaataaaaact 680

                                                                       
Query: 481 tcagtggaaagcaatttttataatgctctttatctgtaagttttatgatgttctataaca 540
           ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 tcagtggaaagtaatttttataatgttctttatctgtaagttttatgatgttctataaca 740

                 
Query: 541 aaataa 546
           ||||||
Sbjct: 741 aaataa 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)