Query= MSMg01no421_l09.b1 MSMg01no421_l09.b1 CHROMAT_FILE:
MSMg01no421_l09.b1 PHD_FILE: MSMg01no421_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:59 2005
(202 letters)
>mm_chr14_28898624_28899225
Length = 602
Score = 362 bits (187), Expect = e-104
Identities = 199/203 (98%), Gaps = 2/203 (0%)
Strand = Plus / Plus
Query: 1 ttagaatggaccctacctaccttattgtgtccattgaggagtggtgatagtttagtattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ttagaatggaccctacctaccttattgtgtccattgaggagtggtgatagtttagcattc 260
Query: 61 atctggaggtgttcttttggtctgaaaaa-actttgtgtctcaaaggagatcactcataa 119
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 atctggaggtgtt-ttttggtctgaaaaatactttgtgtctcaaaggagatcactcataa 319
Query: 120 tgtgtaggaagagaaagtccttgatttgacttttcatatgtgtgtgcatgctcatgggca 179
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtgtaggaagagaaagttcttgatttgacttttcatatgtgtgtgcatgctcatgggca 379
Query: 180 aggagagtgggaagggaagggaa 202
|||||||||||||||||||||||
Sbjct: 380 aggagagtgggaagggaagggaa 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 602
Length adjustment: 8
Effective length of query: 194
Effective length of database: 594
Effective search space: 115236
Effective search space used: 115236
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_l09.g1 MSMg01no421_l09.g1 CHROMAT_FILE:
MSMg01no421_l09.g1 PHD_FILE: MSMg01no421_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:59 2005
(468 letters)
>mm_chr14_29071583_29072450
Length = 868
Score = 874 bits (452), Expect = 0.0
Identities = 464/468 (99%)
Strand = Plus / Minus
Query: 1 agcccattacagaaggctctagacctggaaaaccacttagtaagataacatgccagtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 668 agcccattacagaaggctctagacctggaaaaccacttagtaagataacatcccagtgac 609
Query: 61 cagactccagcctgacactgattcccatttgctgtgatactgatctgttgaatggttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cagactccagcctgacactgattcccatttgctgtgatactgatctgttgaatggttgcc 549
Query: 121 ttgagaccaaagcattgatctccctggacagccttgaggctggcccactcacaagcagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttgagaccaaagcattgatctccctggacagccttgaggctggcccactcacaagcagta 489
Query: 181 cttctctgtagacctgaacttcaagtcacaagacatacgacagacagcaaagaagaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cttctctgtagacctgaacttcaagtcacaagacatacgacagacagcaaagaagaagca 429
Query: 241 gactgcacaactttatttggtctttccagagttccactgaagaaaggatcaataagaatg 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gactgcacaactttaagtggtctttccagagttccactgaagaaaggatcaataagaatg 369
Query: 301 tgctcttaaagacaaactgcatcctactggtgatgtcaccaaagcacaatcaaatactgc 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgttcttaaagacaaactgcatcctactggtgatgtcaccaaagcacaatcaaatactgc 309
Query: 361 caaccaatatcccagtgctttctatattcatagaaaatctgctaataagcacagactcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 caaccaatatcccagtgctttctatattcatagaaaatctgctaataagcacagactcca 249
Query: 421 tatcacacgctatgagtgataagtaagtgggtgagacttataaatgat 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tatcacacgctatgagtgataagtaagtgggtgagacttataaatgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
