Query= MSMg01no421_p08.b1 MSMg01no421_p08.b1 CHROMAT_FILE:
MSMg01no421_p08.b1 PHD_FILE: MSMg01no421_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:18 2005
(456 letters)
>mm_chr14_46436455_46437310
Length = 856
Score = 824 bits (426), Expect = 0.0
Identities = 443/450 (98%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 7 ggaattccagggtatttcacctttatcttaatctgttgagtccttctctagggacattct 66
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ggaattccagggtaggtgacctttatcttaatctgttgagtccttctctagggacattct 269
Query: 67 agaactattactggggtgtggggaatggaaacttttgctgaggacgcctggaaactattg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agaactattactggggtgtggggaatggaaacttttgctgaggacgcctggaaactattg 329
Query: 127 ctaaggaggtctggaaactgctgctgacccattgtccttaccttaggccaggtggtggga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctaaggaggtctggaaactgctgctgacccattgtccttaccttaggccaggtggtggga 389
Query: 187 cagtttctgtgtagctgcctgaagcctgttcccccccccccccccccaagtaattgactt 246
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 390 cagtttctgtgtagctgcctgaagcctgttcccccccccccccc---aagtaattgactt 446
Query: 247 gcctgggcttatctggatttgtcaagttcttatgcctagttccctaactgccaatttgaa 306
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 447 gcctgggcttatctggatttgtcaagttcttaggcctagttccctaactgccaatttgaa 506
Query: 307 gtctgtcatggaagcaacctagccttctcattctgccttttcagtaatgggtcatctcga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtctgtcatggaagcaacctagccttctcattctgccttttcagtaatgggtcatctcga 566
Query: 367 atctttgagaggtttctatgggctggtattgttgcttgagagtaaatctgttccttaaca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atctttgagaggtttctatgggctggtattgttgcttgagagtaaatctgttccttaaca 626
Query: 427 ggcctaactttataaagcattgattatgca 456
||||||||||||||||||||||||||||||
Sbjct: 627 ggcctaactttataaagcattgattatgca 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_p08.g1 MSMg01no421_p08.g1 CHROMAT_FILE:
MSMg01no421_p08.g1 PHD_FILE: MSMg01no421_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:18 2005
(244 letters)
>mm_chr14_46612258_46612901
Length = 644
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 ttggccctcttcatcctcgctgtgtgttctcaaagccagaacttcatttaagcatgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttggccctcttcatcctcgctgtgtgttctcaaagccagaacttcatttaagcatgacct 384
Query: 61 tagaagatgagtgatcctctcagcatttcctggtatttggggaaaggaatgtttttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tagaagatgagtgatcctctcagcatttcctggtatttggggaaaggaatgtttttattt 324
Query: 121 gactgcagatgtcactgggtttacaggaaggatttggtaacacattcatgccaatactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gactgcagatgtcactgggtttacaggaaggatttggtaacacattcatgccaatactgc 264
Query: 181 acttaccccggatttttgctctgtaggaagaacacatgtcaaggctcactgtttgttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acttaccccggatttttgctctgtaggaagaacacatgtcaaggctcactgtttgttaaa 204
Query: 241 tgg 243
|||
Sbjct: 203 tgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
