Query= MSMg01no421_p21.b1 MSMg01no421_p21.b1 CHROMAT_FILE:
MSMg01no421_p21.b1 PHD_FILE: MSMg01no421_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:21 2005
(548 letters)
>mm_chr14_12573202_12574149
Length = 948
Score = 1002 bits (518), Expect = 0.0
Identities = 539/546 (98%), Gaps = 2/546 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcctccaatctccttaaaaggtgcttcaagggttcaaaaggaccaaagactct 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ggaattctcctccaaactccttaaaaggtgcttcaagggttcaaaaggaccaaagactct 689
Query: 64 ctttgttcacttcttacctgagttatgcaacttcccttgaaacctaacatcaaccctggt 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 688 ctttgttcacttcttacctgagttatgcaacttcccttgaaacccaacatcaaccctggt 629
Query: 124 gggggctgttagagtccctaagaggacaccaaacccaccaagatttccatacctactcaa 183
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gggggctgttagagtctctaagaggacaccaaacccaccaagatttccatacctactcaa 569
Query: 184 gctacccaaagctactgtgactccagggtgggatggggagggcctggaagaagtatcctt 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 568 gctacccaaagctactgtgactccagggtgggatggggagggcctagaagaagtatcctt 509
Query: 244 ctatattgtttaccattatttcaaacacgggacattcacaggagcatataaagctgaagt 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 508 ctatattgtttaccattatttcaaacacaggacattcacaggagcatataaagctgaagt 449
Query: 304 gggaaatagaaatcatgcagacatcattaagtctttggggaggttagctttatatctgat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gggaaatagaaatcatgcagacatcattaagtctttggggaggttagctttatatctgat 389
Query: 364 ctccatggcacttaaact-aagaacaaaccaagttaccactgtcccaacggctcaagtaa 422
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctccatggcacttaaa-tgaagaacaaaccaagttaccactgtcccaacggctcaagtaa 330
Query: 423 taagttgatggcacccagtagtgatcctgaactgtgatcaagcagaagtcaggtggagag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 taagttgatggcacccagtagtgatcctgaactgtgatcaagcagaagtcaggtggagag 270
Query: 483 atcagatcctatgggacaaatgaaactcaaagaactataacagagaaaaaattattttga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atcagatcctatgggacaaatgaaactcaaagaactataacagagaaaaaattattttga 210
Query: 543 attcca 548
||||||
Sbjct: 209 attcca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_p21.g1 MSMg01no421_p21.g1 CHROMAT_FILE:
MSMg01no421_p21.g1 PHD_FILE: MSMg01no421_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:21 2005
(392 letters)
>mm_chr14_12408146_12408937
Length = 792
Score = 704 bits (364), Expect = 0.0
Identities = 385/392 (98%)
Strand = Plus / Plus
Query: 1 tcttagtaagaaagcacacgttttatgttttaagcatgaccctttaaggctctgagtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttagtaagaaagcacacgttttatgttttaagcatgaccctttaaggctctgagtctg 260
Query: 61 tggtcccaccattatcttggttatctcatttcttaactcttctcatgaaatctataactt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tggtcccaccattatcttggttatctcatttcttaattcttctcatgaaatctataactt 320
Query: 121 gggaaccgaggagatggctaatttgctgaggtgtttgttgcacaagcattagaaactgag 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaccgaggagatggcttatttgctgaggtgtttgttgcacaagcattagaaactgag 380
Query: 181 tacagaacccagcaccatcaccaagcttccggtgaccctagaggtcatcgggtggggcct 240
| |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ttcagaccccagcaccagcaccaagcttccagtgaccctagaggtcatcgggtggggcct 440
Query: 241 ggtggtgtaagtctgaggagctcagcgtggtcaggacggcagggctcattgctttgtctg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtggtgtcagtctgaggagctcagcgtggtcaggacggcagggctcattgctttgtctg 500
Query: 301 taaccctttgagttatggactttggtcactggtgatgagttgaagagacaggaaccaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaccctttgagttatggactttggtcactggtgatgagttgaagagacaggaaccaagt 560
Query: 361 ggaggtggttctgtggatagatggatatctca 392
||||||||||||||||||||||||||||||||
Sbjct: 561 ggaggtggttctgtggatagatggatatctca 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
