Query= MSMg01no423_c16.b1 MSMg01no423_c16.b1 CHROMAT_FILE:
MSMg01no423_c16.b1 PHD_FILE: MSMg01no423_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:47 2005
(482 letters)
>mm_chr14_121758663_121759542
Length = 880
Score = 874 bits (452), Expect = 0.0
Identities = 474/482 (98%), Gaps = 2/482 (0%)
Strand = Plus / Plus
Query: 1 gggctagagaaaccctgtcctgaaaagagaggaaatttagaccaggctcaggtgtctgtg 60
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 201 gggctagagaaaccctgtcctgaaa--agaggaaatttagaccgggctcaggtgtctgtg 258
Query: 61 gaaggcgactctgcacctccaggttaggagaattccttcctgagggagaggtaaacctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 259 gaaggcgactctgcacctccaggttaggagaattccttcctgagggagaggtagacctca 318
Query: 121 tccactctcacactctgaggctcgacaacaaacccaagtccaccatgaggaaccaatgtg 180
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tccaccctcacaccctgaggctcgacaacaaacccaagtccaccatgaggaaccaatgtg 378
Query: 181 ttcaccttcgtgggcacctccagcagctacagtcaagtctccgccccacggccacacaga 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 379 ttcaccttcgtgggcacctccagcagctgcagtcaagtctccgccccacggccacacaga 438
Query: 241 tcgagatccctctgctaattctcttcagcctctatattcttgcccctccagagaccacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcgagatccctctgctaattctcttcagcctctatattcttgcccctccagagaccacat 498
Query: 301 gcaaccagggccaaatcgcatgcggcaagtggctttgaggagtggctgaaatccctccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcaaccagggccaaatcgcatgcggcaagtggctttgaggagtggctgaaatccctccca 558
Query: 361 acccctgcttctgagggaatgttaacagcccataggctcgctcctgatgcctcctaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acccctgcttctgagggaatgttaacagcccataggctcgctcctgatgcctcctaacaa 618
Query: 421 gcatgcacagctgatctgaggtagacggcagctgctaggcggactgccttctacaaaggc 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 619 gcatgcacagctgatctgaggtagacagcagctgctaggcggactgccttctacaaaggc 678
Query: 481 ac 482
||
Sbjct: 679 ac 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 880
Length adjustment: 10
Effective length of query: 472
Effective length of database: 870
Effective search space: 410640
Effective search space used: 410640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_c16.g1 MSMg01no423_c16.g1 CHROMAT_FILE:
MSMg01no423_c16.g1 PHD_FILE: MSMg01no423_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:47 2005
(171 letters)
>mm_chr14_121919637_121920207
Length = 571
Score = 329 bits (170), Expect = 6e-95
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 1 tctccaaaaccttaacatgaaaatatattacttttacattcagagagggcagggagtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tctccaaaaccttaacatgaaaatatattacttttacattcagagagggcagggagtttt 311
Query: 61 tctggtttcgtttggctctgctctgttttattgtccactgatggtgctgataacatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctggtttcgtttggctctgctctgttttattgtccactgatggtgctgataacatggaa 251
Query: 121 aggaacccatctcttatcatcaggaaggatgtgagcttttcgtatcactg 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aggaacccatctcttatcatcaggaaggatgtgagcttttcgtatcactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
