Query= MSMg01no424_e17.b1 MSMg01no424_e17.b1 CHROMAT_FILE:
MSMg01no424_e17.b1 PHD_FILE: MSMg01no424_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:13 2005
(569 letters)
>mm_chr14_111728676_111729644
Length = 969
Score = 1023 bits (529), Expect = 0.0
Identities = 552/567 (97%), Gaps = 12/567 (2%)
Strand = Plus / Plus
Query: 1 accaagaaaatctaagaaaaataatgcttttctcaatgtacttaactcaataatattagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accaagaaaatctaagaaaaataatgcttttctcaatgtacttaactcaataatattagt 260
Query: 61 aaatttgcctacattttattatgtggacactttaggagcgtatttttcaggctagcacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatttgcctacattttattatgtggacactttaggagcgtatttttcaggctagcacca 320
Query: 121 cagctaagtattttgttgttgttgttgttgttgttgttgttgttgttgaaggtaaaaata 180
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cagctaagtattttgttgttgttgttgttgttgttg------------aaggtaaaaata 368
Query: 181 gaaatataataaaatcaggattttttgcatttattttagcaacaaaattagtcaattaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 369 gaaatataataaaatcaggattttttgcatttattttagcaacaaaattaatcaattaat 428
Query: 241 ttatgttatggaagggtaagaaatgttttatttattttaaccaatgaacttcttagagaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttatgctatggaagggtaagaaatgttttatttattttaaccaatgaacttcttagagaa 488
Query: 301 aaataagtccatagactttgacattatgtgctagacatcttcatatgcttcctgctagca 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aaataagtccatagattttgacattatgtgctagacatcttcatatgcttcctgctagca 548
Query: 361 taaagctttgaaagaatctagaactttttattgtaatatggaaggtccatatatatttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 taaagctttgaaagaatctagaactttttattgtaatatggaaggtccatatatatttac 608
Query: 421 tatatttatagtcttatgaactatatattcagcatgactatataaatcttacttccaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tatatttatagtcttatgaactatatattcagcatgactatataaatcttacttccaaat 668
Query: 481 atcaagagaattaattaatttatatcatacaaatattggtttaagtaatatgtggcttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 atcaagagaattaattaatttatatcatacaaatattggtttaagtaatatgtggcttaa 728
Query: 541 aaatagtaagatttcttttttcctcca 567
|||||||||||||||||||||||||||
Sbjct: 729 aaatagtaagatttcttttttcctcca 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_e17.g1 MSMg01no424_e17.g1 CHROMAT_FILE:
MSMg01no424_e17.g1 PHD_FILE: MSMg01no424_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:13 2005
(331 letters)
>mm_chr14_111915975_111916705
Length = 731
Score = 574 bits (297), Expect = e-168
Identities = 321/331 (96%), Gaps = 4/331 (1%)
Strand = Plus / Minus
Query: 1 actaattttgtatcttttgtcttcctgattcagatggtaagcttcaaaaataaagttttt 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 actaattttgtatc----gtcttcctgattcagatggtaagcttcaaaaataaagttttt 490
Query: 61 ggatttttggcttgctttgctttctttttaagttggtgtaacatctgcattttcatgtga 120
|||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 489 ggatttttggcttgctttgctttctttttaagtttgtgcaacatttgcattttcatgtga 430
Query: 121 atatatttttatgaacatcaatactgacataatctctattaattcattagaatcaaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atatatttttatgaacatcaatactgacataatctctattaattcattagaatcaaatac 370
Query: 181 taggataataagagactaaccttttatttaaagtatctcaggatttccttagtatttcta 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 taggataataagggactaaccttttatttaaagtatctcaggatttccttagtatttcta 310
Query: 241 tatgcttatatagaaaattttttctaatattgaatttgttctagtgctaaaataatatag 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 309 tatgcttatatagaaaattttttctaatactgaatttgttctagtgctaaaataatatag 250
Query: 301 ccatggaaggagttacagataactcaatgaa 331
|||||||||||||||||| ||||||||||||
Sbjct: 249 ccatggaaggagttacagttaactcaatgaa 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
