Query= MSMg01no424_j07.b1 MSMg01no424_j07.b1 CHROMAT_FILE:
MSMg01no424_j07.b1 PHD_FILE: MSMg01no424_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:34 2005
(518 letters)
>mm_chr14_32920787_32921708
Length = 922
Score = 397 bits (205), Expect = e-114
Identities = 275/315 (87%), Gaps = 31/315 (9%)
Strand = Plus / Minus
Query: 4 ggaattctttcctgttagttctgagggtttatggagtctctgcattgggcacagttgttt 63
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 315 ggaattctttcctgttagttctgagggtttatggagtctctgcattggacacagttgttt 256
Query: 64 gcttctcaaatctggaagtttatc---tgttttcttttctttt----ttttt-----ttt 111
||||||||||||||| |||| ||| |||||||||||||||| ||||| |||
Sbjct: 255 gcttctcaaatctggtagttaatctgttgttttcttttctttttttctttttctttcttt 196
Query: 112 ttttg------------g------gttttt-gagacagggtttctctgtgtagccctggc 152
||||| | |||||| ||||||||||||||||||||||||||||
Sbjct: 195 ttttgttttgtttttttgttttttgtttttcgagacagggtttctctgtgtagccctgga 136
Query: 153 tgtcctggtactcactctgtagaccagactggcctcgaactcagaaatctgcctgtctct 212
|||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 135 tgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatctgcctgtctct 76
Query: 213 gcctcccaggtgctgggattaaagctgtgtgccaccactgctggcatgttgttttcaata 272
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 75 gcctcccaggtgctgggattaaagctgtgcgccaccactgctggcatgttgttttcaata 16
Query: 273 aagtgtatgattcat 287
||||||| |||||||
Sbjct: 15 aagtgtacgattcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 922
Length adjustment: 10
Effective length of query: 508
Effective length of database: 912
Effective search space: 463296
Effective search space used: 463296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_j07.g1 MSMg01no424_j07.g1 CHROMAT_FILE:
MSMg01no424_j07.g1 PHD_FILE: MSMg01no424_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:34 2005
(531 letters)
>mm_chr14_32901072_32902002
Length = 931
Score = 913 bits (472), Expect = 0.0
Identities = 503/528 (95%), Gaps = 23/528 (4%)
Strand = Plus / Plus
Query: 4 aaggcaaagctcaaaagtcacgatgccaacttggactcctttggtcctagaacctagaac 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 204 aaggcaaagctcaaaagtcacgatgccaacttggactcttttggtcctagaacctagaac 263
Query: 64 tcttttttgtttgtttgtttgtttgtggttttgttttttgtttttgtttttttcgggacg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcttttttgtttgtttgtttgtttgtggttttgttttttgtttttgtttttttcgggacg 323
Query: 124 aaccagactgcctggtctgtttctggcagaatgagaggaagccagcagggctgttcctac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaccagactgcctggtctgtttctggcagaatgagaggaagccagcagggctgttcctac 383
Query: 184 agtaggaacctctcagcaagttgaagggctctgattcccaaacatttttaatactgtcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtaggaacctctcagcaagttgaagggctctgattcccaaacatttttaatactgtcct 443
Query: 244 accatctctggcaatactgtcctaccatctctggccgctgttctaccagaatcttttttt 303
|||||||||||| |||||||||||||||||||||||||
Sbjct: 444 accatctctggc-----------------------cgctgttctaccagaatcttttttt 480
Query: 304 tttttaaagatttatttatttattatatgtaagtaagtacactgtagctgtcttcagata 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttttaaaagatttatttatttattatatgtaagtaagtacactgtagctgtcttcagata 540
Query: 364 ctccagaagagggggtcagatcttgttacagatggttgtgagccaccatgtggttgctgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctccagaagagggggtcagatcttgttacagatggttgtgagccaccatgtggttgctgg 600
Query: 424 gatttgaactctggaccttcggaagaacagtcgggtgctcttacccactgagccatctca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatttgaactctggaccttcggaagaacagtcgggtgctcttacccactgagccatctca 660
Query: 484 ccagtccatctaccagaatcttaagctagagtcttgacttcctgcttt 531
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccagtccatctaccagaatcttaagctagagtcttgacttcctgcttt 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
