Query= MSMg01no424_n09.b1 MSMg01no424_n09.b1 CHROMAT_FILE:
MSMg01no424_n09.b1 PHD_FILE: MSMg01no424_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:53 2005
(591 letters)
>mm_chr14_87769578_87770568
Length = 991
Score = 1013 bits (524), Expect = 0.0
Identities = 553/570 (97%), Gaps = 12/570 (2%)
Strand = Plus / Plus
Query: 22 aacaagttcatattctagtagtgaatttcaggctttctagagaaaggtctttctattctc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aacaagttcatattctagtagtgaatttcaggctttctagagaaaggtctttctattctc 281
Query: 82 tcacacagcccatttcaaatgaacagcccattctgaaaaatcacagaatcaagtaatgta 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tcacacagcccatttcaaatgaacagcccattctgaaaaatcacagaatcaagtaatgta 341
Query: 142 ttctaataatatgccttagaacattacattatgtattatcaatgcaggtctttcatagca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttctaataatatgccttagaacattacattatgtattatcaatgcaggtctttcatagca 401
Query: 202 ctatcttcttgtccaatttgcattgaagtttatagctttttttcgcccccgttggctttt 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctatcttcttgtccaatttgcattgaagtttatagctttttttcgcccccgttggctttt 461
Query: 262 ccttttctagcttgcttttaaaatgaaaatgggagcaaatccaataccatttttagcata 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccttttctagcttgcttttaaaatgaaaatgggagcaaatccaataccatttttagcata 521
Query: 322 tagttgtattctcccttttgtttttttagactatgttatttacagtgcccagtgagatgg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tagttgtattctcccttttgtttttttagactatgttatttacagtgcccagtgagatgg 581
Query: 382 cttagcaggcaaaagcatttgccatcaagccagcctaccagaattcaatccctagatccc 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cttagcaggcaaaagcatttgccatcaagccagcctaccagaattcaatccctagatccc 641
Query: 442 accttgttgggaacaaggaaacaaattcttcaaggtatcctctgacctccttgtgttcaa 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 accttgttgggaacaaggaaacaaattcttcaaggtatcctctgacctccttgtgttcaa 701
Query: 502 tccccattcacataaataaataaataaataaataaataaataaataaataaataaataaa 561
|||||||||||||||||||||||||||| ||| ||| ||| ||| |||
Sbjct: 702 tccccattcacataaataaataaataaacaaacaaacaaacaaacaaa------------ 749
Query: 562 caaacaggagttggagagacagctcagagt 591
||||||||||||||||||||||||||||||
Sbjct: 750 caaacaggagttggagagacagctcagagt 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_n09.g1 MSMg01no424_n09.g1 CHROMAT_FILE:
MSMg01no424_n09.g1 PHD_FILE: MSMg01no424_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:53 2005
(631 letters)
>mm_chr14_87937189_87938219
Length = 1031
Score = 1197 bits (619), Expect = 0.0
Identities = 628/631 (99%)
Strand = Plus / Minus
Query: 1 aaacactactgtttaaatgtgtctccatctgcatgtagaagaaatgagctctacgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aaacactactgtttaaatgtgtctccatctgcatgtagaagaaatgagctctacgccaaa 772
Query: 61 aaattaatgatcatcttcaaggacctgtcatgccacaaagaatagtgaaatctaacaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaattaatgatcatcttcaaggacctgtcatgccacaaagaatagtgaaatctaacaatt 712
Query: 121 catctgatgttaattcaattgccactttttagagaaaagtgtcggataggctcctttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 catctgatgttaattcaattgccactttttagagaaaagtgtcggataggctcctttccc 652
Query: 181 taaacccctttcagaggtcaatctcaaacagtttggatctggaactcagcacagcaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 taaacccctttcagaggtcaatctcaaacagtttggatctggaactcagcacagcaatta 592
Query: 241 aaatgctttaagaaaagttgaaacattcttgggaaaggagagagctatcattttattatt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaatgcaggaagaaaagttgaaacattcttgggaaaggagagagctatcattttattatt 532
Query: 301 ctggtcactgttctgaatgatgattatcaaatattcctgcaaatttgaaaaggagatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctggtcactgttctgaatgatgattatcaaatattcctgcaaatttgaaaaggagatata 472
Query: 361 cttaattttatgacaaatgacaacacttagagctatgcatattaactgaaaaggatgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cttaattttatgacaaatgacaacacttagagctatgcatattaactgaaaaggatgaag 412
Query: 421 atatatctggtactttaggagaggaagtaattatcgcaggaatcagaatagaatgttaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atatatctggtactttaggagaggaagtaattatcgcaggaatcagaatagaatgttaat 352
Query: 481 tttctctacactcagctgcagaactggctgagaacatctgaaaagtccttgctttacaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tttctctacactcagctgcagaactggctgagaacatctgaaaagtccttgctttacaat 292
Query: 541 gaagcacatcgttagatgttagacactgcacgtgctgagcaagtgcctaataaaaatgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gaagcacatcgttagatgttagacactgcacgtgctgagcaagtgcctaataaaaatgat 232
Query: 601 attgctattgaaaagctgtctcttctggcct 631
|||||||||||||||||||||||||||||||
Sbjct: 231 attgctattgaaaagctgtctcttctggcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
