AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGCTGTTTTCTGTTATAACATTCTACACCATGTCTTAAAAAGTGT
TCGATGTGGGCTGGAGAGATAGCTCAGCAGTTAAGAGCACTGACTGCTTT
TCCAGAGGTCCTGAGTTCAATTCCACTGTTGTGCCTGAAGACAACAACAG
TGTACTTACATATATAAAATAAATAAATGTTTTTTTAAAAAAGTGTTTGA
TGTGAAGCTTGTCTGTATTGAATTCAGCTCTTTCTACTGGTCTTTGCCTT
TAGGTGAACATCAGTCAAGTAGTATGTAATAAATGAACTGGTTCCTAAAG
GATGTGTGCACTCAGCAGGGAGGTTTTGAGGAGGTTGAGAGGCTCTGTGG
ACTTTTAGAAGAGTCAAAGAGAGATTCACTGCTTCTAGGAAAGGCCAGAC
TGCTAGGAAAAGGGGTGGGGAATAAGGAAAAGATGGGGGCGCTGTGTGGC
AGGGAGGATAGAAACAGCATTTCCTTACCTGAGAAACCCTCCCCCTAAAT
ATTTATCTTTGTGAGGAAATGCCGAAACAAGTAATGACGTANACAAGTTA
ACATCCGCAGTTCATTTTCAGACCCTGCAAATCATCACCAAGGAGAAGGT
GTGGGTCAGAGGCAGCTATAGCCAGGCAGAATCGGTTTCAAAAAAAGCGA
ATCATCTGGAGC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGGGGAATACCGAATGGCTGAGAA
GCACCTGAAAAATGTTCAGCATCCTTAATCATCAGAGAAATGCAAATCAA
AACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTC
CTCCACTGTTGGTGGGATTGCAAGCTTGTAGAACCACTCTGGAAATCAGT
TTGGTGGTTCCTCAGAAAATTGGACATAGTACTACAGGAGGATCCTGCAA
TACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTATGAAGGAC
ACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGATG
GAAAGAGCCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGAT
ACATTTACACAATAGAATACTACTCAGCTATTAAAAAGAATGATTTATGA
AACTCCTAGGCAAATGGATGGACTGGAGGGCATCATCCTGAGAGAGGTAA
CCCATTCACTTTAGAACTCCCCGGATATGTACTCCCCTGATAATTGCATA
TTATACCCTACTTTATAATACCCGGTCCTGGCCAGTTTCTGTGGTCAATT
TGAACTCAATCGGGCGTTCATCCTATGG

Query= MSMg01no425_a02.b1 MSMg01no425_a02.b1 CHROMAT_FILE:
MSMg01no425_a02.b1 PHD_FILE: MSMg01no425_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:06 2005
         (600 letters)



>mm_chr14_106325059_106326058
          Length = 1000

 Score = 1058 bits (547), Expect = 0.0
 Identities = 582/594 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgctgttttctgttataacattctacaccatgtcttaaaaagtgttcgatgt 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgctgtattctgttataacattctacaccatgtcttaaaaagtgttcgatgt 264

                                                                       
Query: 65  gggctggagagatagctcagcagttaagagcactgactgcttttccagaggtcctgagtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggctggagagatagctcagcagttaagagcactgactgcttttccagaggtcctgagtt 324

                                                                       
Query: 125 caattccactgttgtgcctgaagacaacaacagtgtacttacatatataaaataaataaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caattccactgttgtgcctgaagacaacaacagtgtacttacatatataaaataaataaa 384

                                                                       
Query: 185 tgtttttttaaaaaagtgtttgatgtgaagcttgtctgtattgaattcagctctttctac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 tgtttttttaaaaaagtgtttgatgtgaagcttgtctgtattgaattcagctccttctac 444

                                                                       
Query: 245 tggtctttgcctttaggtgaacatcagtcaagtagtatgtaataaatgaactggttccta 304
           ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||
Sbjct: 445 tggtctttgcctttaggtgaacatcagtcaagtagcaggtaataaatgagctggttccta 504

                                                                       
Query: 305 aaggatgtgtgcactcagcagggaggttttgaggaggttgagaggctctgtggactttta 364
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 505 aaggatgtgtgcactcagcagggaggttttgaggaggttgagaggctctaaggactttta 564

                                                                       
Query: 365 gaagagtcaaagagagattcactgcttctaggaaaggccagactgctaggaaaaggggtg 424
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaagagtcaaagagagaatcactgcttctaggaaaggccagactgctaggaaaaggggtg 624

                                                                       
Query: 425 gggaataaggaaaagatgggggcgctgtgtggcagggaggatagaaacagcatttcctta 484
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 625 gggaataaggaaaagatgggggcgctgtgtagcagggaggatagaaacagcatttcctta 684

                                                                       
Query: 485 cctgagaaaccctccccctaaatatttatctttgtgaggaaatgccgaaacaagtaatga 544
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 685 cctgagaaaccctccccctaaatatttatctttgtgaggaaatgccctaacaagtaatga 744

                                                                 
Query: 545 cgtanacaagttaacatccgcagttcattttcagaccctgcaaatcatcaccaa 598
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgtaaacaagttaacatccgcagttcattttcagaccctgcaaatcatcaccaa 798


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space:   584100
Effective search space used:   584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)