Query= MSMg01no425_e24.b1 MSMg01no425_e24.b1 CHROMAT_FILE:
MSMg01no425_e24.b1 PHD_FILE: MSMg01no425_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:29 2005
(507 letters)
>mm_chr14_20969639_20970545
Length = 907
Score = 934 bits (483), Expect = 0.0
Identities = 498/503 (99%)
Strand = Plus / Minus
Query: 5 gaattcacatcccagttctgccacttaccttggactggaccctgctttcttatcgttaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaattcacatcccagctctgccacttaccttggactggaccctgctttcttatcgttaaa 648
Query: 65 ataggctaagggtccctgctttgcaagacctagccattccgtgagagaagtgttttaagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ataggctaagggtccctgctttgcaagacctagccattccgtgagagaagtgttttaagt 588
Query: 125 acatgatcagtacctgtccccacacgtgcccaactataacttcagcagctacacagttaa 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 587 acatgatcagtacctgtccccacacgtgcccaactatcacttcagcagctacacagttaa 528
Query: 185 gaggtggtgtctggaaaagccacagtaaggaggctgataatggcttcagtatttgaggtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gaggtggtgtctggaaaagccacagtaaggaggctgataatggcttcagtatttgaggtc 468
Query: 245 ttaagcaccgtggacaggtgaggtgactttccagaacagagggactgtgtgagcacaaag 304
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttaagcaccgtggacaggtgaagtgactttccagaacagagggactgtgtgagcacaaag 408
Query: 305 gattaaagaaaggatccagaggcagccagtgagagcacgaggattctggctcttggaaca 364
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 407 gattaaagaagggatccagaggcagccagtgagagcacgagggttctggctcttggaaca 348
Query: 365 ccataggactgcagttttccaggtcaggagtagaggatggaagaagggctgtgttcggga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ccataggactgcagttttccaggtcaggagtagaggatggaagaagggctgtgttcggga 288
Query: 425 agccataggagtcgtgggagagatcaaatagctgcatggatgcttcttagctggaacccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agccataggagtcgtgggagagatcaaatagctgcatggatgcttcttagctggaacccc 228
Query: 485 tgcagtaggctcatgtcttggcc 507
|||||||||||||||||||||||
Sbjct: 227 tgcagtaggctcatgtcttggcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_e24.g1 MSMg01no425_e24.g1 CHROMAT_FILE:
MSMg01no425_e24.g1 PHD_FILE: MSMg01no425_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:29 2005
(446 letters)
>mm_chr14_20793752_20794598
Length = 847
Score = 833 bits (431), Expect = 0.0
Identities = 444/449 (98%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 1 ttgtgaataggtgttctacttttagacttaaaagttggagaatcggtcttaaaaagttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttgtgaataggtgttctacttttagacttaaaagttggagaatcggtcttaaaaagttgt 258
Query: 61 tcagctaacgccatcactacatacacatcacccgaggcccagggctggccataaaataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcagctaacgccatcactacatacacatcacccgaggcccagggctggccataaaataat 318
Query: 121 aagagtcataaaccatatgtcaggaaaacaca--cacacacacacacacacacacacaca 178
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 319 aagagtcataaaccatatgtcaggaaaacacaaacacacacacacacacacacacacaca 378
Query: 179 cacacatctcattaaaatttcagtgtttgttgacgccctttccagccaccaaataccctg 238
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cacacatcccattaaaatttcagtgtttgttgacgccctttccagccaccaaataccctg 438
Query: 239 aggaaaagaatgcctgtgagtgttctgtgtggccagagcggtgggaatagtctc-ttctg 297
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 439 aggaaaagaatgcctgtgagtgttctgtatggccagagcggtgggaatagtctccttctg 498
Query: 298 catcgcagaagcacacccacccatctgctcttgcttacgaaagaatcctgccctcatcct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 catcgcagaagcacacccacccatctgctcttgcttacgaaagaatcctgccctcatcct 558
Query: 358 cacagacctgctgttgctcactcacgttccgccttgagctgaaatttaacaattaaggaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cacagacctgctgttgctcactcacgttccgccttgagctgaaatttaacaattaaggaa 618
Query: 418 gtgttttctgctgtgcacaaaacaggcag 446
|||||||||||||||||||||||||||||
Sbjct: 619 gtgttttctgctgtgcacaaaacaggcag 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 847
Length adjustment: 10
Effective length of query: 436
Effective length of database: 837
Effective search space: 364932
Effective search space used: 364932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
