Query= MSMg01no425_i10.b1 MSMg01no425_i10.b1 CHROMAT_FILE:
MSMg01no425_i10.b1 PHD_FILE: MSMg01no425_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:46 2005
(608 letters)
>mm_chr14_111927436_111928442
Length = 1007
Score = 789 bits (408), Expect = 0.0
Identities = 595/744 (79%), Gaps = 137/744 (18%)
Strand = Plus / Minus
Query: 1 ggagttaggcatagttagcagtgaacaaaaagatactgtactgaaaacaatgttaaagac 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 843 ggagttaggcatagttagcagtgagcaaaaagatactgtactgaaaacaatgttaaagac 784
Query: 61 aaggactgattcctgaaattgttttctgaccactatatgaactctggctagcatgtgttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaggactgattcctgaaattgttttctgaccactatatgaactctggctagcatgtgttc 724
Query: 121 aggtttatacaaagcatgtatgtgtgagtgtg--cacacat------------------- 159
|||||||||||||||||||||||||||||||| |||||||
Sbjct: 723 aggtttatacaaagcatgtatgtgtgagtgtgcacacacatgcacacacacacacacaca 664
Query: 160 ---------------------------------------acacacacacacacttttatc 180
|||||||||||||||||||||
Sbjct: 663 cacacacgcgcgcgcgcgtgcacacacacacacacacacacacacacacacacttttatc 604
Query: 181 caaaatatgttattgtagataagtgataaaaattaatcagtgaaatgttgataggctata 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 caaaatatgctattgtagataagtgataaaaattaatcagtgaaatgttgataggctata 544
Query: 241 agtagaaactagttccctaactgggccccttacatgaattcaccttgtacttgtttctgc 300
||||||||| ||||||||||||| || |||| |||||||||| |||||||||||||||||
Sbjct: 543 agtagaaac-agttccctaactgagctccttgcatgaattcaacttgtacttgtttctgc 485
Query: 301 aataaatacaacaaaatttcatggagctaatttttaaaagatggaagtcagagtggtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aataaatacaacaaaatttcatggagctaatttttaaaagatggaagtcagagtggtgtt 425
Query: 361 taatttttccaaaagtgcactataaaccaattctaaaaggcattaagtcatagactccat 420
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 424 taatttttccaaaagtgtactataaaccagttctaaaaggcattaagtcatagactccat 365
Query: 421 ctgttaaaat-------------------------------------------------- 430
| ||||||||
Sbjct: 364 cagttaaaatggtcggtttacttatagcttacataattctgtattataaatgggtaatgg 305
Query: 431 -----------gga-gatatatatatatatat-------------t-actatttccatac 464
||| ||||||||||||||||| | |||||||||||||
Sbjct: 304 gttcatgttaaggaggatatatatatatatatatatatatatatataactatttccatac 245
Query: 465 attcatgctatcaatttttatgaaaccttaataaagctataaaagttgttttttcttttg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 attcatgctatcaatttttatgaaaccttaataaagctataaaagttgttttttcttttg 185
Query: 525 ttataatattatttcgaatagaaatgaactgatagctaaagggcattgttaacactcagt 584
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttttaatattatttcaaatagaaatgaactgatagctaaagggcattgttaacactcagt 125
Query: 585 ctgcttattcctgactaatgagaa 608
||||||||||||||||||||||||
Sbjct: 124 ctgcttattcctgactaatgagaa 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1007
Length adjustment: 10
Effective length of query: 598
Effective length of database: 997
Effective search space: 596206
Effective search space used: 596206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_i10.g1 MSMg01no425_i10.g1 CHROMAT_FILE:
MSMg01no425_i10.g1 PHD_FILE: MSMg01no425_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:46 2005
(528 letters)
>mm_chr14_111720312_111721239
Length = 928
Score = 984 bits (509), Expect = 0.0
Identities = 524/529 (99%), Gaps = 2/529 (0%)
Strand = Plus / Plus
Query: 1 actttaattacaaagtcctagaaggtgacttacaatattatcttctgctgctttatatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttaattacaaagtcctagaaggtgacttacaatattatcttctgctgctttatatct 260
Query: 61 acattggaaggttgttgttagggtagtcagctgtatcagtttctcccttagcacctgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acattggaaggttgttgttagggtagtcagctgtatcagtttctcccttagcacctgatt 320
Query: 121 cacaacaaactcttaggttatggagacagttt-cgcctttctatcaaagtttattaactc 179
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 321 cacaacaaactcttaggttatggagaca-tttacgcctttctatcaaagtttattaactc 379
Query: 180 atttctctgcaacttaagctttttgagccttccttaacttttaaatgattcatagaataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atttctctgcaacttaagctttttgagccttccttaacttttaaatgattcatagaataa 439
Query: 240 agagcctttattagtaacacattgacaaattgttctctaaagaggacagactttcggttt 299
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agagcctttaaaagtaacacattgacaaattgttctctaaagaggacagactttcggttt 499
Query: 300 aaatatatgtttccataaagtctaattattcctagtatattttattcaaaatgagaataa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaatatatgtttccataaagtctaattattcctagtatattttattcaaaatgagaataa 559
Query: 360 atagctatttaggttgtaaaatttgatgttattatagaataatttataatactttctttt 419
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 atagctatttaggttgtaaaatttgatattattatagaataatttataatactttctttt 619
Query: 420 cttatagaataagaaactctaaggataagagtgtggataggaaaacagatgaacacacac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttatagaataagaaactctaaggataagagtgtggataggaaaacagatgaacacacac 679
Query: 480 aaataggtatctctttggttcactatttaatgggtttttgtttcagaat 528
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaataggtatctctttggttcactatttaatgggtttttgtttcagaat 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
