Query= MSMg01no425_p12.b1 MSMg01no425_p12.b1 CHROMAT_FILE:
MSMg01no425_p12.b1 PHD_FILE: MSMg01no425_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:20 2005
(431 letters)
>mm_chr14_32252444_32253274
Length = 831
Score = 760 bits (393), Expect = 0.0
Identities = 420/433 (96%), Gaps = 7/433 (1%)
Strand = Plus / Minus
Query: 5 gaattcctatactatacaaaagttttagagttcttgacagataagactaagattagctga 64
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 792 gaattcctatactaaacaaaagttttagagtgcttgacagataagactaagattagctga 733
Query: 65 gtgccttaatcccagaactcaggaggcagaagcttgtgaatctttgtgaaggctaacctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtgccttaatcccagaactcaggaggcagaagcttgtgaatctttgtgaaggctaacctg 673
Query: 125 gtctacacagctagaccctgtctccaaga-------aaaaaagactaatatttaatgttt 177
||||||||||||||||||| ||||||| | ||||||||||||||||||||||||
Sbjct: 672 gtctacacagctagaccctatctccaaaataataataaaaaagactaatatttaatgttt 613
Query: 178 taatgtttcttaccccgctgagactaaaggcatgtaccatcctgcctagcatgagaaaga 237
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 taatgtttcttaacccgctgagactaaaggcatgtaccatcctgcctagcatgagaaaga 553
Query: 238 catttttaatgaaaaagagtccaaggaccattcagcacagctgtcctgaagaaggacatg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catttttaatgaaaaagagtccaaggaccattcagcacagctgtcctgaagaaggacatg 493
Query: 298 tgatgccccagagcgtcacaggactgcccctgagtgtttagaaaataaatccaagtggct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgatgccccagagcgtcacaggactgcccctgagtgtttagaaaataaatccaagtggct 433
Query: 358 ataaatggaaataccctgaagctcagctctgcgaggggaggaccaaggatgggtccctgg 417
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 432 ataaatggaaataccctgaagctcagctctgggaggggaggaccaaggatgggtccctgg 373
Query: 418 tgtgtgtgtgtgg 430
|||||||||||||
Sbjct: 372 tgtgtgtgtgtgg 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_p12.g1 MSMg01no425_p12.g1 CHROMAT_FILE:
MSMg01no425_p12.g1 PHD_FILE: MSMg01no425_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:20 2005
(468 letters)
>mm_chr14_32050149_32051016
Length = 868
Score = 890 bits (460), Expect = 0.0
Identities = 466/468 (99%)
Strand = Plus / Plus
Query: 1 agtatgtggcaattctctaagtttcccccactaagccaagctcatgaaatcattaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtatgtggcaattctctaagtttcccccactaagccaagctcatgaaatcattaaaaac 260
Query: 61 atgcaaatgtaagataggctctcttcagtttccttcaggccctctgccagattcccatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcaaatgtaagataggctctcttcagtttccttcaggccctctgccagattcccatcc 320
Query: 121 cagctgccttgcctaatgtgaatgttctggtacacaagtccatcgtcacacccatgagaa 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagctgccttgcctaatgcgaatgttctggtacacaagtccatcgtcacacccatgagaa 380
Query: 181 atgctgtggggatatgagtggcccgctccagctgcaaagctaagaccacactggctggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgctgtggggatatgagtggcccgctccagctgcaaagctaagaccacactggctggaa 440
Query: 241 tgagtggaaccttctgccccacacaagtacggcaatcctactatgttgagttcagggacc 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tgagtggaaccttctgccccacacaagtatggcaatcctactatgttgagttcagggacc 500
Query: 301 ccagcctcaccaccaaggtctgttctgggaccaaagtgggctactgtgctggctcactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagcctcaccaccaaggtctgttctgggaccaaagtgggctactgtgctggctcactga 560
Query: 361 gcagaacttacacacttatgtgaggatgacactctccagccctggaatcccagttaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagaacttacacacttatgtgaggatgacactctccagccctggaatcccagttaccca 620
Query: 421 gaaagtcgattccctttatgttgaaatcctagtgactaacttttgtct 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaagtcgattccctttatgttgaaatcctagtgactaacttttgtct 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
