Query= MSMg01no426_g04.b1 MSMg01no426_g04.b1 CHROMAT_FILE:
MSMg01no426_g04.b1 PHD_FILE: MSMg01no426_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:54 2005
(439 letters)
>mm_chr14_25977366_25978203
Length = 838
Score = 787 bits (407), Expect = 0.0
Identities = 431/439 (98%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 1 ctcccagaaacctccatgggtttaaaactcttcccaagttcacaaaataggtggcacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctcccagaaacctccatgggtttaaaactcttcccaagttcacaaaataggtggcacatt 687
Query: 61 tgagactcaaacctggacctatttgggcctcagagctcatgattgtaagctggtccttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgagactcaaacctggacctatttgggcctcagagctcatgattgtaagctggtccttgg 627
Query: 121 ggtcctggagagaacacaagcttacacatatacacatgaccaaggaatcagcatgaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ggtcctggagagaacacaagcttacacatatacacatgaccaaggaatcagcatgaagag 567
Query: 181 accaagaaccccaaggctcccatcccactaccaccatgacacacacaggaagtgactcct 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 566 accaagaaccccaaggctcctgtcccactaccaccatgacacacacaggaagtgactcct 507
Query: 241 tactgctctgagcaccagtttcccagctagtcagatggcaagattctttacgaatatctc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 506 tactgctctgagcaccagtttcccagctagtcagatggcaagattccttacgaatatctc 447
Query: 301 ttctccccattcccagaggaggactacatggtgtagaaatgaagacaggactatacaaac 360
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 446 ttctccccattcccagaggaggactacatggtgtagaaatgaagacagtactatacaagc 387
Query: 361 cctgtctaccctgtcatggagaccaggaaagctctgtatagtgtatcgaggaggtaccat 420
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 386 cctgtctacgctgtcatggagaccaggaaagctctgtatagtgtatccaggaggtac-at 328
Query: 421 ctccaccagcccagtccct 439
|||||||||||||||||||
Sbjct: 327 ctccaccagcccagtccct 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_g04.g1 MSMg01no426_g04.g1 CHROMAT_FILE:
MSMg01no426_g04.g1 PHD_FILE: MSMg01no426_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:54 2005
(174 letters)
>mm_chr14_25787534_25788107
Length = 574
Score = 304 bits (157), Expect = 2e-87
Identities = 160/161 (99%)
Strand = Plus / Plus
Query: 1 tctatttccaaccctgaatggggtctgaagtcttagacatgcctgtgggacccacaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatttccaaccctgaatggggtctgaagtcttagacatgcctgtgggacccacaccaa 260
Query: 61 gagactgtaccatctttccccctatagactcttgttaaaacaatggccaccctgctgtcc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gagactgtaccatctttccccctatagactctggttaaaacaatggccaccctgctgtcc 320
Query: 121 tagagcagggtgcagagtaccattaagggagggttgttgtt 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagcagggtgcagagtaccattaagggagggttgttgtt 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
