Query= MSMg01no426_m06.b1 MSMg01no426_m06.b1 CHROMAT_FILE:
MSMg01no426_m06.b1 PHD_FILE: MSMg01no426_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:25 2005
(416 letters)
>mm_chr14_73749175_73749990
Length = 816
Score = 774 bits (400), Expect = 0.0
Identities = 409/412 (99%)
Strand = Plus / Minus
Query: 5 gaattctcattatcttgccacttaactgtatgaaatgatattctgctgtttctcattttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaattctcattatcttgccacttaactgtatgaaatgatattctgctgtttctcattttc 557
Query: 65 tgaagacttccatattcatctgctttgttattctaaaatattatttcattcacatgtaat 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgaagacttccatagtcatctgctttgttattctaaaatattatttcattcacatgtaat 497
Query: 125 gccatacacaagctttttaaaatacaatgatattattcctatcttcaaaaaataaggaac 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tccatacacaagctttttaaaatacaatgatattattcctatcttcaaaaaataaggaac 437
Query: 185 aaaaattagctaattcatacttaaatctttagtcaatattcctcgtttggcttaaaaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaaaattagctaattcatacttaaatctttagtcaatattcctcgtttggcttaaaaact 377
Query: 245 gacttttcatagttggtttttgttaactgggattcaaatcgggttgtcacggtttaccca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gacttttcatagttggtttttgttaactgggattcaaatcgggttgtcacggtttaccca 317
Query: 305 ctttggctgccatatatacttaagtctatttcaacccctgagatctttccttcaccacct 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 316 ctttggctgccatatatacttaagtctatttcaacccctgagatatttccttcaccacct 257
Query: 365 tccagccatttatttacttattttatttatgaaatggggtctcatatagccc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tccagccatttatttacttattttatttatgaaatggggtctcatatagccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_m06.g1 MSMg01no426_m06.g1 CHROMAT_FILE:
MSMg01no426_m06.g1 PHD_FILE: MSMg01no426_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:25 2005
(448 letters)
>mm_chr14_73562927_73563774
Length = 848
Score = 756 bits (391), Expect = 0.0
Identities = 433/447 (96%), Gaps = 2/447 (0%)
Strand = Plus / Plus
Query: 2 aggaaggaaaaggagaagactgagttaaaccatccctgaatttgcagctatagatctgtg 61
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 202 aggaaggaaaaggagaagactgagtaaaaccatccctgaattcgcagctatagatctgtg 261
Query: 62 tcacattagactgaatggtctggggagtctcaggccatgaagtatattaagagtgtgata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcacattagactgaatggtctggggagtctcaggccatgaagtatattaagagtgtgata 321
Query: 122 gagattcatgcagatcctttcg-agcatgagttgcctctacggaagcctggaaggatcat 180
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagattcatgcagatccttt-gtagcatgagttgcctctacggaagcctggaaggatcat 380
Query: 181 cagaggcagcttttcagtgttagtaagccacatgtgatctaagataagcagttgtgggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaggcagcttttcagtgttagtaagccacatgtgatctaagataagcagttgtgggca 440
Query: 241 ctaaggcaccgtgtatgtggtgaaagacacatccttgtggcctgtccttgctgatttaga 300
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 ctaaggcaccgtggctgtggtgaaagacacatccttgtggcctttccttgctgatttaga 500
Query: 301 gtcggccagtgcttctctccattaagtgcctgcttctgtcagctgagcagaggggtgggg 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcggccagtacttctctccattaagtgcctgcttctgtcagctgagcagaggggtgggg 560
Query: 361 tttgtacggaaaggactgaagtctgcaggtggcagatgctctcctgtttgggaacgtggc 420
||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||
Sbjct: 561 tttgtacggaaaggactgaagtctgcaggtggcggacactcttctgtttgggaacgtggc 620
Query: 421 tcctgctcttccccatcttggtctctc 447
||||||||||||| ||||||||||||
Sbjct: 621 tcctgctcttccctgtcttggtctctc 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
